Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2193 114 9e-21 >seq2193 Length=52601 Score = 114 bits (126), Expect = 9e-21 Identities = 177/248 (71%), Gaps = 10/248 (4%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| ||| || || | || | ||| |||||||| |||||||| Sbjct 24831 TTGCATACCACCTCTCAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTA 24772 Query 44164 ATCGGCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 |||| | ||| | |||| |||| ||||| || ||||| |||||||| || ||| Sbjct 24771 GTCGGATAAAGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGA 24714 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGG 44279 |||| ||| | ||||||||| || || || ||| || ||| | || ||||| | Sbjct 24713 TCTGGAGGAATACCTTCCTTATCTTGGATTTTAGACTTGACATTGT--CAATAGTGTCAG 24656 Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339 ||||| || || | ||||| ||||| || || | ||||| |||||||||||||| Sbjct 24655 AAGATTCAACTTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAGATTTGCAT-- 24598 Query 44340 TGTGAATG 44347 ||| |||| Sbjct 24597 TGTTAATG 24590 Score = 109 bits (120), Expect = 4e-19 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-- 44168 || ||||| | |||||| || | || | || |||||||||||||||||||||| Sbjct 25280 CCACCTCTTAATCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCGGAT 25221 Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 |||| | |||| |||| ||||| || || || |||||||| || ||||||| || Sbjct 25220 AAAGTT--CTACCGTCTTCCAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGAG 25163 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | ||||||||| || || || ||| || ||| | || ||||| | ||||| Sbjct 25162 GAATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGT--CAATAGTGTCAGAAGATTC 25105 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||| ||||| || || | |||||| ||||| |||||||| Sbjct 25104 AACTTCTAAGGTAATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 25054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359979299921010