Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq2193 114 9e-21
>seq2193
Length=52601
Score = 114 bits (126), Expect = 9e-21
Identities = 177/248 (71%), Gaps = 10/248 (4%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| ||| || || | || | ||| |||||||| ||||||||
Sbjct 24831 TTGCATACCACCTCTCAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTA 24772
Query 44164 ATCGGCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
|||| | ||| | |||| |||| ||||| || ||||| |||||||| || |||
Sbjct 24771 GTCGGATAAAGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGA 24714
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGG 44279
|||| ||| | ||||||||| || || || ||| || ||| | || ||||| |
Sbjct 24713 TCTGGAGGAATACCTTCCTTATCTTGGATTTTAGACTTGACATTGT--CAATAGTGTCAG 24656
Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339
||||| || || | ||||| ||||| || || | ||||| ||||||||||||||
Sbjct 24655 AAGATTCAACTTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAGATTTGCAT-- 24598
Query 44340 TGTGAATG 44347
||| ||||
Sbjct 24597 TGTTAATG 24590
Score = 109 bits (120), Expect = 4e-19
Identities = 165/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-- 44168
|| ||||| | |||||| || | || | || ||||||||||||||||||||||
Sbjct 25280 CCACCTCTTAATCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCGGAT 25221
Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
|||| | |||| |||| ||||| || || || |||||||| || ||||||| ||
Sbjct 25220 AAAGTT--CTACCGTCTTCCAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGAG 25163
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286
| | ||||||||| || || || ||| || ||| | || ||||| | |||||
Sbjct 25162 GAATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGT--CAATAGTGTCAGAAGATTC 25105
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | ||||| ||||| || || | |||||| ||||| ||||||||
Sbjct 25104 AACTTCTAAGGTAATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 25054
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359979299921010
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |