Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq2179 125 1e-23 >seq2179 Length=11267 Score = 125 bits (138), Expect = 1e-23 Identities = 140/187 (75%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 50713 TATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTAG 50772 |||||||| || ||||||||||| ||| ||||| || || ||||| |||||| | | Sbjct 6991 TATCCTGTTTATTGTATCAAAGATCTTGTGACATGGGGTTGGGTGTTCCATTCAACATTG 7050 Query 50773 CTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGCCGTCGATATGAAACCGGGAGAAT 50832 ||||||| || || || || | |||| || || |||||| ||| | ||||||| Sbjct 7051 CTTCTTATGCATTGTTGACCAAGATGATTGCCCACATCGTCGACATGGACTGTGGAGAAT 7110 Query 50833 TTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCACGTCGATGCTTTAAAGGAGC 50892 | |||||||| ||||| ||||| ||| ||||| | ||||| | ||||| || || |||| Sbjct 7111 TCATTCATACTTTAGGTGACGCGCATGTTTACTTAGATCATATTGATGCCTTGAAAGAGC 7170 Query 50893 AATTGAC 50899 |||| || Sbjct 7171 AATTTAC 7177 Score = 84.2 bits (92), Expect = 3e-11 Identities = 157/228 (69%), Gaps = 6/228 (3%) Strand=Plus/Plus Query 50473 AAGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGC-GCGTTACATA 50531 |||| |||||||| || ||||| || || ||||||||||||||||| || | || ||| Sbjct 6694 AAGGTGATTTAGGTCCAGTTTATGGATTCCAATGGAGACATTTTGGGGCTGAGT---ATA 6750 Query 50532 A--ATTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGA 50589 | |||| || |||| |||||||| |||||| |||| | | |||| | Sbjct 6751 AGGATTGTGATACTGATTATACCGGTCAAGGATATGATCAATTGCACGACGTGATAAAAA 6810 Query 50590 CGTTGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATA 50649 ||||| |||||||| ||||| | | ||| | ||| | || ||||| || | ||| Sbjct 6811 AATTGAAGACAAACCCTTACGATAGAAGAATTATTATGTCTGCTTGGAACCCGCCTGATT 6870 Query 50650 TAGATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATG 50697 | | | | | | | || || |||||||| || || ||||| |||| Sbjct 6871 TTGCAAAGATGGCTCTTCCACCATGTCATGTATTCTGCCAATTCTATG 6918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667054103746800