Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq2179 125 1e-23
>seq2179
Length=11267
Score = 125 bits (138), Expect = 1e-23
Identities = 140/187 (75%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 50713 TATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTAG 50772
|||||||| || ||||||||||| ||| ||||| || || ||||| |||||| | |
Sbjct 6991 TATCCTGTTTATTGTATCAAAGATCTTGTGACATGGGGTTGGGTGTTCCATTCAACATTG 7050
Query 50773 CTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGCCGTCGATATGAAACCGGGAGAAT 50832
||||||| || || || || | |||| || || |||||| ||| | |||||||
Sbjct 7051 CTTCTTATGCATTGTTGACCAAGATGATTGCCCACATCGTCGACATGGACTGTGGAGAAT 7110
Query 50833 TTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCACGTCGATGCTTTAAAGGAGC 50892
| |||||||| ||||| ||||| ||| ||||| | ||||| | ||||| || || ||||
Sbjct 7111 TCATTCATACTTTAGGTGACGCGCATGTTTACTTAGATCATATTGATGCCTTGAAAGAGC 7170
Query 50893 AATTGAC 50899
|||| ||
Sbjct 7171 AATTTAC 7177
Score = 84.2 bits (92), Expect = 3e-11
Identities = 157/228 (69%), Gaps = 6/228 (3%)
Strand=Plus/Plus
Query 50473 AAGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGC-GCGTTACATA 50531
|||| |||||||| || ||||| || || ||||||||||||||||| || | || |||
Sbjct 6694 AAGGTGATTTAGGTCCAGTTTATGGATTCCAATGGAGACATTTTGGGGCTGAGT---ATA 6750
Query 50532 A--ATTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGA 50589
| |||| || |||| |||||||| |||||| |||| | | |||| |
Sbjct 6751 AGGATTGTGATACTGATTATACCGGTCAAGGATATGATCAATTGCACGACGTGATAAAAA 6810
Query 50590 CGTTGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATA 50649
||||| |||||||| ||||| | | ||| | ||| | || ||||| || | |||
Sbjct 6811 AATTGAAGACAAACCCTTACGATAGAAGAATTATTATGTCTGCTTGGAACCCGCCTGATT 6870
Query 50650 TAGATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATG 50697
| | | | | | | || || |||||||| || || ||||| ||||
Sbjct 6871 TTGCAAAGATGGCTCTTCCACCATGTCATGTATTCTGCCAATTCTATG 6918
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 667054103746800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |