Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq2193 111 4e-19
seq2023 107 5e-18
>seq2193
Length=52601
Score = 111 bits (122), Expect = 4e-19
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || | || || || || ||||| | || || ||| || |||
Sbjct 24829 CAAATTTTCGTCAAGACCTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCTGAC 24888
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| ||| || ||||| ||||| ||||| || ||||| || || |||
Sbjct 24889 ACAATCGATAACGTTAAATCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAA 24948
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || ||||| || || || | ||||| || || ||| | | || || ||| |
Sbjct 24949 CGTTTGATTTTCGCTGGTAAGCAATTAGAAGACGGTAGAACTTTGTCTGACTACAACATT 25008
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| ||||| || | ||| | ||||| ||| | |||
Sbjct 25009 CAAAAGGAATCCACTTTACATTTAGTTTTAAGATTGAGA 25047
Score = 111 bits (122), Expect = 4e-19
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || | || || || || || ||| | || || ||| || |||
Sbjct 25057 CAAATTTTCGTCAAGACCTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCTGAC 25116
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| || || || ||||| ||||| || ||||| || || |||
Sbjct 25117 ACTATTGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCTCCAGATCAACAA 25176
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || ||||| || || || | ||||| || || ||| | ||||||| ||| ||
Sbjct 25177 CGTTTGATTTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTTTATCCGATTACAACATC 25236
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| ||||| || | ||| | || |||||| | |||
Sbjct 25237 CAAAAGGAATCTACTTTACATTTAGTCTTGAGATTAAGA 25275
>seq2023
Length=11923
Score = 107 bits (118), Expect = 5e-18
Identities = 146/203 (72%), Gaps = 3/203 (1%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| |||||||||| || || | || || || || || ||| | || || |||
Sbjct 3911 AAAATGC---AAATTTTCGTCAAGACCTTAACTGGTAAGACTATTACCTTAGAAGTTGAA 3967
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| ||||| || || || |||||| ||||| || ||||| ||||| || || ||
Sbjct 3968 TCTTCTGACACTATTGACAATGTCAAATCCAAGATCCAAGACAAGGAAGGTATTCCACCT 4027
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
||||| ||| || | ||||| || || || || | |||||||| || ||| | | ||
Sbjct 4028 GACCAACAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGAC 4087
Query 178095 TATAACGTCCAAAAAGAATCAAC 178117
|| ||| ||||||| ||||| ||
Sbjct 4088 TACAACATCCAAAAGGAATCTAC 4110
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203692180300820
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |