Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq1387 181 1e-40
>seq1387
Length=15432
Score = 181 bits (200), Expect = 1e-40
Identities = 577/885 (65%), Gaps = 11/885 (1%)
Strand=Plus/Plus
Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733
|||| ||||| ||| | ||||| |||||||||||||| || ||| || ||||| |
Sbjct 2203 TTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTTACCAGCTAATGAAATATTTT 2262
Query 16734 CCATGAAATCAAAAGGATTAGTAGC-TGAAAATATTTTAGAGTACCCCAGTTCGGCGATT 16792
|||| || ||||| ||||| | | | | || || | |||| | | | | | |
Sbjct 2263 CCATAAAGTCAAATGGATTTTGAACATTATAAACCTTCTTATTACCAAA-TGCAACTAAT 2321
Query 16793 AATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGA 16852
||||| || || |||||||| | |||||| ||||| |||| |||||||| |||| | |
Sbjct 2322 AATCTGTCGGCAACAAATTCAACATATTGACACATCAATTTACAGTTCATACCTAATAAA 2381
Query 16853 CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912
| || || | || || || ||| || || || ||| |||| ||||| ||||||
Sbjct 2382 CTAACTGGTAATGCATCAGTGAAATATTCTTTTTCAATATCAACAGCTTCAACAATAATC 2441
Query 16913 CTAGCAACTCGTTCCTCGGAC-GGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971
| | || ||| | | | ||| ||| || | ||| ||| | | ||| || ||
Sbjct 2442 TTTTCCACGATTTC-TGGATCTGGTCTATTGTTCAAATGAGCAAATAATAAACAAGCAAA 2500
Query 16972 ATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCAT 17031
||| |||||| || || ||||| | || | ||| || || || || || || |||||
Sbjct 2501 ATCAGTATGTAACCCTTCATCTCTACAAATTAATTCATTTGAGAAAGTTAAACCTGGCAT 2560
Query 17032 CTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTC 17091
|||| |||||||||||| || || | ||| || || ||| |||||| ||||| ||
Sbjct 2561 TAACCCTCTTTTCTTTAACCAGAAAATTGAGGCAAATGATCCACTAAAGAAAATACCTTC 2620
Query 17092 GACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTT 17151
|| | ||||| || | ||||| ||| || || | || | | | |||||| |
Sbjct 2621 AACAGCAGCAAATGCAACTAATCTTTCAGCATATAAGACTTCAGTATCAGTGATCCATCT 2680
Query 17152 CTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTT 17211
|||| || |||||| | || ||| || ||| || || |||||||| |
Sbjct 2681 TAATGCCCAATCAGCTTTTCTTCTGATACAAGGAATATGTTCAATAGCATTAAATAAGTA 2740
Query 17212 CTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTG 17271
|| ||||| | | || | ||||| ||||| || | ||| || |||| || ||
Sbjct 2741 ATCAGCTTCCTTTGGATCTTTAATATAAGTATCAATTAAAAGGGAATAAGTTTCAGAATG 2800
Query 17272 TATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTC 17331
|| || || || || ||||| || || || || ||||| | |||||||||||
Sbjct 2801 AATATTTTCAATCATAATTTGAAACCCATAGAATGATTTAGCTTCTGGAATTTGAACTTC 2860
Query 17332 CACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391
| | || ||| || |||||| || || || || || || || || || ||
Sbjct 2861 TGCTGAAAAATTTTCAATTAAATTTTCATTAACAATACCATCAGATGCAGCAAAGAATGC 2920
Query 17392 CAATATATGCTT--AATGAAATATTTTTCGTC--CGGTGTA-AGAACGCGCCAGTCCTTT 17446
| | | ||| |||||||||| |||| || | | | | | | ||| || | |
Sbjct 2921 TA--AGACTCTTGAAATGAAATATCTTTCATCATCATTCAATTTATCTCTCCAATCATGT 2978
Query 17447 AAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATAC 17506
||||| || || ||| | |||||| | |||||||| || |||| || || ||
Sbjct 2979 AAATCCTTACTTAAATCAATTTCTTCAGCAGTCCAAAATGATGCTTCTGCTTTCTTGTAA 3038
Query 17507 ATATTCCAAATATCATTGTATTGTATGGGGAATACAACATATCTA 17551
| | |||||| |||| ||| || || || | |||| |||||
Sbjct 3039 AATTGCCAAATTTCATGATATCTAATTGGAAACATAACAAATCTA 3083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517533482963640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |