Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06- 03] 1,873 sequences; 16,614,112 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1163 96.9 3e-15 >seq1163 Length=41016 Score = 96.9 bits (106), Expect = 3e-15 Identities = 456/730 (62%), Gaps = 67/730 (9%) Strand=Plus/Plus Query 101666 GTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTA 101725 || || ||| ||| | |||||||| ||||||| ||| | |||||||| |||| |||| Sbjct 7578 GTAAATTGCTCTTTCAATGCATCAATATGATCTAAATAAACATGAGCATCACCTAAAGTA 7637 Query 101726 TGGATAAACTCTCCAGGCACTAGAT-TAGT-GACATGAGCAATCATGCAAGTTAAAAGAG 101783 || || || |||||| || | || | | ||| || |||||||| || || | | Sbjct 7638 TGAATGAATTCTCCA--CAGTCCATGTCGACGACGTGGGCAATCATCTTGGTCAACAATG 7695 Query 101784 AATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTT 101843 ||| |||||| || ||||| || || || ||||| ||| ||||||||||||| | Sbjct 7696 CATAAGAAGCAATATTGAATGGAACACCCAAGCCCATGTCACAAGATCTTTGATACAATA 7755 Query 101844 GACAGGAAAGCT------TTCCA---------------TCAC-AGACAT----------- 101870 |||||| |||| ||||| |||| ||| | Sbjct 7756 AACAGGATAGCTTCGGTCTTCCAGTAATCTTGCTTTGCTCACTAGATTTTGAATCTGCCC 7815 Query 101871 -------------AAAATT-----------GACTTAATACATGACAAGGCGGCAACACCA 101906 |||||| ||| || |||||||| || || | ||| Sbjct 7816 CTTCTGTAGCTGGAAAATTAACATAGAATTGACAGAAGACATGACATGGTGGAAGAGCCA 7875 Query 101907 TTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTG 101966 | || | || || | |||||||||| |||| | || |||||||| || |||| Sbjct 7876 TCTTTGCAAAATCAGGCGGATTCCAAGCAGACATAATAATTCTTCTATCATATGGATTTG 7935 Query 101967 TTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCC 102026 | |||| | | |||| | | |||||||||| ||||| || ||||||| Sbjct 7936 TCTTTAATTTTTTTATCACGTCGTGTAATTGGTCATATCCTTGACCAGTATAATCAGTAT 7995 Query 102027 CAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGAT 102086 || | ||||||| || ||||| ||||| ||||| || || ||||| || || || | || Sbjct 7996 CACAATCTTTATACTCAGCTCCAAAATGTCTCCATTGGAACCCATAAACCGGACCTAAAT 8055 Query 102087 CTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCAT 102146 | ||||| | ||| || || | || || ||| || | ||| ||||| | | Sbjct 8056 CACCTTCTCGACGATCAGTTAATCCCAAATTGTCCAAATATTCACGAGAACCATTACCTT 8115 Query 102147 CCCAAATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACC 102206 ||||||| | || || | | || | ||| ||||| || || | ||||| Sbjct 8116 CCCAAATCTTGACACCTTTTTCACTTAACAACTTGGCATCAGTCGAACCAGCAACAAACC 8175 Query 102207 ACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA-- 102264 | | || || | || | ||| | | || |||||||| || ||||| |||||||| Sbjct 8176 ATAGGAGCTCATGAATGATACCCTTTGAGAAAACTCTCTTTGTTGTTAAGAGTGGAAAAG 8235 Query 102265 -TTCATTTTCTAAACTAAACCTAGACT---GTGTTCCAAAAATACTCAGTGTTCCAGTCC 102320 ||||| ||| |||||| ||| ||| | |||||||| ||| ||||| | Sbjct 8236 TGTCATTGGACAAATCAAACCTTAACTGTGGTGGTGCAAAAATAGATTTTGTACCAGTTC 8295 Query 102321 CTGTTCTGTC 102330 | ||||| || Sbjct 8296 CGGTTCTATC 8305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361242953651123