Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq1308 500 1e-136
seq1387 367 2e-96
seq1180 113 5e-20
>seq1308
Length=6085
Score = 500 bits (554), Expect = 1e-136
Identities = 1412/2146 (66%), Gaps = 58/2146 (3%)
Strand=Plus/Plus
Query 52804 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 52862
|||| || |||||||| | ||| || || | || || | || ||| ||||| || || |
Sbjct 3385 CAATAGTAAATTGAATAGCAGCAGAAGCAGCTTGAGTTCTTAAATAATACATACCAGTCT 3444
Query 52863 TTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTG 52922
| | || |||| ||||| ||||||||||| || | ||| | || ||
Sbjct 3445 TCAACCCCTTCTTCCAACCGTAGAAATGCATACTGGTCAATTTACCCATTGTTGGGTCCT 3504
Query 52923 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 52982
||||||||||||| ||||||| |||||| ||||| ||| | || || |||||||| |
Sbjct 3505 TAATATGGATATTCAAAGATTGAGATTGATCAATGAATGCTGCTCTATCAGCAGCCATAT 3564
Query 52983 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTG 53042
|| || ||||| | ||||||||| | || ||||| | ||||| || || |
Sbjct 3565 CAATAATATGTTTTTGAGAAATTTCCCATACTGTCTTATATAAGGCTTTAATTTCATCAG 3624
Query 53043 GAAGGTTTG-TATTC--TGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCAT 53099
| | || | || | ||||| || ||| || | ||||| ||| | || | | |
Sbjct 3625 GGATATTAGGTAATGATTGAATGGACCCATTATTTGAAATAATACTACTTTTAACGGCTT 3684
Query 53100 CATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATT 53159
||||||| | | || |||| |||| | | | |||||||| | ||| ||||
Sbjct 3685 CATTCCAAATACCTAAATCAACTAAATCTCTTAATAAAAATGGATTAACAATTTGGAATT 3744
Query 53160 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTAT 53219
| |||| | ||||| | | ||||| || ||||| ||||| | | | |||||||
Sbjct 3745 CACCAGCAAGAACTCTTCTGGAATAAATGTTTGAAGTATATGGTTCAAAACATTCATTAT 3804
Query 53220 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 53279
| ||||| ||||| | ||||| ||||| |||||||| || ||||| | ||||| |
Sbjct 3805 TACCCAAGATTTGTGATGTTGAAGCAGTTGGCATAGGAGCAACCAAAAGTGAGTTTCTTA 3864
Query 53280 GACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTAC 53337
|| ||| | || || || | ||||| || ||||||| ||| | || | |||
Sbjct 3865 ATCC--ATGCTTTGCCATATTTTGTTTTAAAGTATCCCAATCCCATAATTCAGTTGGTTT 3922
Query 53338 AACNNNNNNNNNNNNNNNTTGTAGAATACCGT----TACTGGCGTACGATCCTACATATG 53393
||||| | || | | |||| | || || ||| |
Sbjct 3923 TCTATTCCATAAATCATATTGTAATAACCCTTGGGATGCTGGTGAAC----CTTGATAAG 3978
Query 53394 TATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAA 53453
| ||||| ||||| | | |||| |||| | | || | ||| ||| ||||
Sbjct 3979 ATTGATATGGACCTTCTTCTTGGGCTAATTCAATAGAAGTTTCAACAGCAGCGTGGTAAA 4038
Query 53454 TGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTA 53513
||||||| || || | |||||| ||| ||||| | ||||||||| |||| |
Sbjct 4039 TGGTTTCAAAAATTTGAATATTTAATTCTCTGGCTTCTTGAGAATCAAATGG-TAATCTT 4097
Query 53514 AGAGA-ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 53572
| || || || || || || || ||||| || || | | | || ||||||| | || ||
Sbjct 4098 AAAGCCATGAAAGCATCAGCCAAACCTTGGACCCCCAAAGCAATTGGTCTATTTTTCATA 4157
Query 53573 TTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTT 53632
|| || ||| |||||||||| ||||||||||||| ||| |||| |||||| | ||
Sbjct 4158 TTTGAATTTTTGGCTTCTGGAACAGGATAATAATTACGATCAATAACTTTATTTAAATTA 4217
Query 53633 C---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCA-------AATTGTC- 53681
| | ||||| ||| | || | | ||| ||||| | ||| ||
Sbjct 4218 CGAGTAACAATC---TTGGTAATTTCATGTAATTTATCAAAATTATACCATGAATGATCA 4274
Query 53682 -CATCTATT---ACAAACA-TGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTC 53736
||||| || |||||| || | || || || || || | |||||| || || || ||
Sbjct 4275 TCATCTTTTTCAACAAACGCTGGT-AAGGCGATTGAAGCTAAATTACAGACAGCAACTTC 4333
Query 53737 ATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAA 53796
| || | ||||| | || ||| || | ||| | || || | |||||
Sbjct 4334 TTCAGGTGATGAATATTCAACAATTTCACAACATAAGTTAGATGATTTAATAATACCTAA 4393
Query 53797 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGT 53856
||| | |||||| |||||| ||||| ||||| ||||| | || ||||| ||||||||
Sbjct 4394 ATTCTTTTGATTGGTCTTTTCATTACAAGCATCTTTATATAACATAAATGGAGTACCAGT 4453
Query 53857 TTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATT-TGT 53915
|||| | |||| ||||| ||| | | ||| | | ||||| || || || | |
Sbjct 4454 TTCAGTTTGGGCTTCTAAAATGGAATACCATAATTTTTGTGCCTTAAT---AGTTTGTCT 4510
Query 53916 ATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATT 53973
| | | ||| | ||| ||| | ||| ||| ||||||| || || || ||||||
Sbjct 4511 ACCACGACCTTCACGTTCATATTTTTCATATAATTGTTCAAATTCTTCACCATAAACATC 4570
Query 53974 GTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 54033
||||||||| ||||| || | | || | ||| || || | | | ||| ||
Sbjct 4571 AGGTAATCCAGGAGCTTCATTAGGGGAAAATAATGTCCAATCACCATTTTGTTCCACACG 4630
Query 54034 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTC 54093
|||||||| | |||||||||||| | ||| |||| |||||||| |||| ||| ||
Sbjct 4631 CTTCATAAATAAATCAGGAATCCATAATGCTGGGAATAAATCTCTGGCTCTAATTTCTTC 4690
Query 54094 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 54153
|| ||| ||| ||| ||| ||| | || | | |||||| |||||||| ||||| ||
Sbjct 4691 TTTACCTTGATTTTTTCTAATATCAATAAAATCAAAAATATCTGAATGCCATGGTTCTAA 4750
Query 54154 GTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 54213
|| | || | | | || || | || || || || ||||| | || | ||||||||
Sbjct 4751 ATAGAGGGCAAAAGCACCTGGTCTCTTATTACCACCTTGATCGACATAACGTGCGGTGTT 4810
Query 54214 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATA 54273
|| |||| | | ||| || |||||||| ||||| | |||||| || || | |||||
Sbjct 4811 GTTGAAAACACGTACCATGGGGATAATACCGTTGGAAGTACCATTAGTACCAGCAATATA 4870
Query 54274 GCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGAT 54333
||| | | |||||||||| ||| || ||| || || || || | || || ||
Sbjct 4871 AGCCCCAGTAGAACGAATATTATGAATATGTAAACCAATACCACCAGCACTCTTTGAAAT 4930
Query 54334 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 54393
||||| ||| ||| || |||||||| || || || || |||||| ||||| ||
Sbjct 4931 CAATGCACATGTTTTCAAAGTATCATAAATCCCATCAATTGAATCATCTTTCATGGCAAC 4990
Query 54394 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 54453
|| ||||| |||||||| ||| || || ||||||||||| || || ||| |
Sbjct 4991 TAAGAAACATGACGACATTTGTGGACTTGGGGTACCGGCATTAAATAAAGTTGGTGAACC 5050
Query 54454 GTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCT-GAGTCTATATCCC 54512
|| || || | |||| || | | ||| || | || ||| || ||| |||||||
Sbjct 5051 ATGAGTGAAAAACTTTTGTGACATCATATTATAAGATTCAATAACTCGAG-GGATATCCC 5109
Query 54513 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 54572
|||||| || | ||| || | ||| | | || || ||||||||| | | ||
Sbjct 5110 TACCATGAATACCAATTGCCACTCTCATGATTAAATGTTGTGGTCTTTCAGCAACTTTAC 5169
Query 54573 TGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGA 54630
|| | | | | || || ||| |||| ||||||||||| |||||||| || || |||
Sbjct 5170 CATTAACTCTTAATAAATAAGATCTTTCTAAAGTTTTAAATCCAAAATAATTATAATTGA 5229
Query 54631 AAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATC 54690
|| || || ||||||| |||| |||| || | || ||| || || || | ||
Sbjct 5230 AA--TCACGATCGTAAACAATAGCTGAATTTAATTCATCGGCATGTTCACAAATAATAT- 5286
Query 54691 CATGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAA 54749
||| | ||| ||||| || ||||||||||| | | || || || ||||| | |
Sbjct 5287 CATAAGTCTCCTTGGAAATCATAGGAGAATGTTTATCGGTCTTGGGGTTAACATAATCAT 5346
Query 54750 ATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGG 54809
|||| || || | |||| | | || |||| | |||| ||| |||| ||| ||||| |
Sbjct 5347 ATAATTCTTTACTAACTTGAGAATATTGTTTGGTAGTTTGTTTATGTAAATTAGATACAG 5406
Query 54810 CTATTCTAGCGGCTAGAATGGCATAATCCGGATG--TTGT-GTAGTACAAGTGGCTGCTA 54866
| |||||||| |||| |||||||||||| ||||| | || || || || || ||
Sbjct 5407 CAATTCTAGCAGCTAAAATGGCATAATCAGGATGAATAGTGGTCATATAA---GCAGCAG 5463
Query 54867 TTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 54912
||||||| | | | || ||||| ||||| ||||| |||| |||
Sbjct 5464 TTTCGGCAGCTAAGTTATCTAATTCAACCGTGGTTACACCATGATA 5509
>seq1387
Length=15432
Score = 367 bits (406), Expect = 2e-96
Identities = 649/935 (69%), Gaps = 22/935 (2%)
Strand=Plus/Plus
Query 23825 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTT 23884
|| || |||||| || ||||| || ||| || | ||||| ||||| ||||||||
Sbjct 2183 TTTAGCCATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTT 2242
Query 23885 ACCTTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGA--TTCTT 23942
||| ||||||| ||||||||||| || || ||||||| ||||||||| | |||||
Sbjct 2243 ACCAGCTAATGAAATATTTTCCATAAAGTCAAATGGATTTTGAACATTATAAACCTTCTT 2302
Query 23943 TTAAATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATT 24002
| | || ||| || | ||||| || || ||||| || | |||| ||||| |
Sbjct 2303 ATTA--CCAAATGCAACTAATAATCTGTCGGCAACAAATTCAACATATTGACACATCAAT 2360
Query 24003 TCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATA 24062
| ||| ||||| |||| | ||||||| | || |||| | | |||||| |||||||
Sbjct 2361 TTACAGTTCATACCTAATAAACTAACTGGTAATGCATCAGTGAAATATTCTTTTTCAATA 2420
Query 24063 GAGACCGCGTCTGTTATAATAGATCTT----ACTGTTTCTTCACTCGGTGGATACAATAA 24118
|| || || | |||| ||||| || ||||| | ||| || ||
Sbjct 2421 TCAACAGCTTCA---ACAATA-ATCTTTTCCACGATTTCTGGATCTGGTCTATTGTTCAA 2476
Query 24119 ATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTC 24178
||| ||| | ||||| || ||||| |||| || || ||||||| |||||||||
Sbjct 2477 ATGAGCAAATAATAAACAAGCAAAATCAGTATGTAACCCTTCATCTCTACAAATTAATTC 2536
Query 24179 GTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA 24238
|| || || || | || ||||||| || | || || | ||| || || || |||||
Sbjct 2537 ATTTGAGAAAGTTAAACCTGGCATTAACCCTCTTTTCTTTAACCAGAAAATTGAGGCAAA 2596
Query 24239 TGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACC 24298
||||||| ||||||||| ||||| || || ||||| |||| | |||||| ||||
Sbjct 2597 TGATCCACTAAAGAAAATACCTTCAACAGCAGCAAATGCAACTAATCTTTCAGCATATAA 2656
Query 24299 GGCGC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 24355
| | | ||| ||||| || |||||||| || || || | | |||||| ||
Sbjct 2657 GACTTCAGTATCAGTGATCCATCTTAATGCCCAATCAGCTTTTCTTCTGATACAAGGAAT 2716
Query 24356 -TGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAA 24414
||| || ||||||||||| | || | ||| || |||||||| ||| |||||||
Sbjct 2717 ATGT-TCAATAGCATTAAATAAGTAATCAGCTTCCTTTGGATCTTTAATATAAGTATCAA 2775
Query 24415 TCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAAC 24474
| ||||| ||| |||| |||||||| |||||||| |||||||| || |||||
Sbjct 2776 TTAAAAGGGAATAAGTTTCAGAATGAATATTTTCAATCATAATTTGAAACCCATAGAATG 2835
Query 24475 ATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTA 24534
|| |||| || | ||| || |||||| |||| ||| |||||||||||| || |
Sbjct 2836 ATTTAGCTTCTGGAATTTGAACTTCTGCTGAAAAATTTTCAATTAAATTTTCATTAACAA 2895
Query 24535 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTG 24594
| || ||| || ||||| || || || || | || |||||| |||| ||
Sbjct 2896 TACCATCAGATGCAGCAAAGAATGCTAAGACTCTTGAAATGAAATATCTTTCATCATCAT 2955
Query 24595 TTAGTTTAT---TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAA 24651
| | ||||| ||||||||| | ||| ||| || ||| | |||||| | |||||||
Sbjct 2956 TCAATTTATCTCTCCAATCATGTAAATCCTTACTTAAATCAATTTCTTCAGCAGTCCAAA 3015
Query 24652 ATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAA 24711
||||||| ||||| || || || | | ||| || ||||||||| ||||||||| ||||
Sbjct 3016 ATGATGCTTCTGCTTTCTTGTAAAATTGCCAAATTTCATGATATCTAATTGGAAACATAA 3075
Query 24712 CAAATCTATTTGGATTTT-TTGCAAGGATTGGTTC 24745
|||||||| |||||||| | ||| || ||||||
Sbjct 3076 CAAATCTACGTGGATTTTCCTTCAA-GAGTGGTTC 3109
>seq1180
Length=50914
Score = 113 bits (124), Expect = 5e-20
Identities = 303/459 (66%), Gaps = 6/459 (1%)
Strand=Plus/Minus
Query 53781 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 53840
|||| ||| || ||||| | |||||| |||| ||||| |||||||| ||||| |
Sbjct 28127 ACTTTATGACCCCCAAATTCTTTTGATTTGATTTTTCATTACAAGCATCCTTGTAAAGCA 28068
Query 53841 TGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCT 53900
| |||| |||||| || | |||||||||| || || |||| | | | ||||
Sbjct 28067 TATATGGGCCACCAGTCTCGGTTTGGGATTCTAATATAGCCATCCATAGTTTATGTGCCT 28008
Query 53901 TTATTATAGATTTGTATCTCTTT--TCTCTTTCGTATAGTGTATACAATCGTTCAAACTC 53958
| | |||| | || | |||||||||||| ||| ||| | | |||||
Sbjct 28007 TGACGGTAGACAC--AGCTAATCCCTCTCTTTCGTATCTCTCATATAATTGGACGAACTC 27950
Query 53959 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 54018
||| || || || |||||| || |||| ||| | | |||||||| || |
Sbjct 27949 GTCGCCATAACAATCACTCAATCCTGGTGCAACATCTGGAGAAAATAACGACCAGTCCGC 27890
Query 54019 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTC 54077
||| || |||||||| |||| || | |||||| | ||| | | | ||| |||| ||| |
Sbjct 27889 GTCTTCTTTCACTCGCCTCATGAATAAATCAGGCACCCATA-ATCCATAGAATAAATCCC 27831
Query 54078 TGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAG 54137
| ||||| || || || || || ||| ||| | | ||| | | | | |||||
Sbjct 27830 TAGTTCTTTGCTCTTCATTACCATGATTTTTTCTCATATCTAAAATATCAAAGATATCGC 27771
Query 54138 AATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTA 54197
|||||| || || | ||||| | | | || |||||||| || || |||||||
Sbjct 27770 CATGCCAAGGCTCTATATATATAGCGAATGCCCCCGGCCGTTTACCACCACCTTGATCTA 27711
Query 54198 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAA 54236
||||| || ||||| ||| | || | | ||||||||
Sbjct 27710 CATATCTTGCAGTGTTGTTAAACACGCGGAGCATTGGAA 27672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593707699493040
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