Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06- 03] 1,873 sequences; 16,614,112 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1163 118 7e-22 >seq1163 Length=41016 Score = 118 bits (130), Expect = 7e-22 Identities = 268/401 (67%), Gaps = 4/401 (1%) Strand=Plus/Plus Query 97231 ACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGAC- 97289 ||||| || |||| || |||||||| || || | ||||| |||| || ||| || | Sbjct 7836 ACATAGAATTGACAGAAGACATGACATGGTGGAAGAGCCATCTTTGCAAAATC--AGGCG 7893 Query 97290 -ATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTA 97348 |||||||||| |||| | ||||||||||| ||| ||||| | || | || || | Sbjct 7894 GATTCCAAGCAGACATAATAATTCTTCTATCATATGGATTTGTCTTTAATTTTTTTATCA 7953 Query 97349 TCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTG 97408 | | |||||| ||| |||| ||| ||||| | | | ||| ||| || | Sbjct 7954 CGTCGTGTAATTGGTCATATCCTTGACCAGTATAATCAGTATCACAATCTTTATACTCAG 8013 Query 97409 CTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCAC 97468 |||||||||| ||||||||||| |||||||| || || | || |||||| | |||| Sbjct 8014 CTCCAAAATGTCTCCATTGGAACCCATAAACCGGACCTAAATCACCTTCTCGACGATCAG 8073 Query 97469 AGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAG 97528 || || | || || ||||| | ||| ||||| | |||||||| | ||||| Sbjct 8074 TTAATCCCAAATTGTCCAAATATTCACGAGAACCATTACCTTCCCAAATCTTGACACCTT 8133 Query 97529 ATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAA 97588 | | | | ||| ||||| || || | |||||| | | || | | | Sbjct 8134 TTTCACTTAACAACTTGGCATCAGTCGAACCAGCAACAAACCATAGGAGCTCATGAATGA 8193 Query 97589 CACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAAA 97629 ||| | | || |||||||| ||||||||||| |||||| Sbjct 8194 TACCCTTTGAGAAAACTCTCTTTGTTGTTAAGAGTGGAAAA 8234 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 97030 GTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTG 97089 |||| |||||| | | |||||||| |||| | ||||| |||||||| |||||||| Sbjct 7578 GTAAATTGCTCTTTCAATGCATCAATATGATCTAAATAAACATGAGCATCACCTAAAGTA 7637 Query 97090 TGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAA 97149 ||||| ||||||||| | | || ||| ||||| ||||| || || | | | Sbjct 7638 TGAATGAATTCTCCACAGTCCATGTCGACGACGTGGGCAATCATCTTGGTCAACAATGCA 7697 Query 97150 TAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGA 97209 || |||||| || || || || || | ||||| ||| ||||||||||| || | Sbjct 7698 TAAGAAGCAATATTGAATGGAACACCCAAGCCCATGTCACAAGATCTTTGATACAATAAA 7757 Query 97210 CAGGAAAGCTT 97220 ||||| ||||| Sbjct 7758 CAGGATAGCTT 7768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346776083896610