Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq1163 118 7e-22
>seq1163
Length=41016
Score = 118 bits (130), Expect = 7e-22
Identities = 268/401 (67%), Gaps = 4/401 (1%)
Strand=Plus/Plus
Query 97231 ACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGAC- 97289
||||| || |||| || |||||||| || || | ||||| |||| || ||| || |
Sbjct 7836 ACATAGAATTGACAGAAGACATGACATGGTGGAAGAGCCATCTTTGCAAAATC--AGGCG 7893
Query 97290 -ATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTA 97348
|||||||||| |||| | ||||||||||| ||| ||||| | || | || || |
Sbjct 7894 GATTCCAAGCAGACATAATAATTCTTCTATCATATGGATTTGTCTTTAATTTTTTTATCA 7953
Query 97349 TCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTG 97408
| | |||||| ||| |||| ||| ||||| | | | ||| ||| || |
Sbjct 7954 CGTCGTGTAATTGGTCATATCCTTGACCAGTATAATCAGTATCACAATCTTTATACTCAG 8013
Query 97409 CTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCAC 97468
|||||||||| ||||||||||| |||||||| || || | || |||||| | ||||
Sbjct 8014 CTCCAAAATGTCTCCATTGGAACCCATAAACCGGACCTAAATCACCTTCTCGACGATCAG 8073
Query 97469 AGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAG 97528
|| || | || || ||||| | ||| ||||| | |||||||| | |||||
Sbjct 8074 TTAATCCCAAATTGTCCAAATATTCACGAGAACCATTACCTTCCCAAATCTTGACACCTT 8133
Query 97529 ATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAA 97588
| | | | ||| ||||| || || | |||||| | | || | | |
Sbjct 8134 TTTCACTTAACAACTTGGCATCAGTCGAACCAGCAACAAACCATAGGAGCTCATGAATGA 8193
Query 97589 CACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAAA 97629
||| | | || |||||||| ||||||||||| ||||||
Sbjct 8194 TACCCTTTGAGAAAACTCTCTTTGTTGTTAAGAGTGGAAAA 8234
Score = 93.3 bits (102), Expect = 3e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 97030 GTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTG 97089
|||| |||||| | | |||||||| |||| | ||||| |||||||| ||||||||
Sbjct 7578 GTAAATTGCTCTTTCAATGCATCAATATGATCTAAATAAACATGAGCATCACCTAAAGTA 7637
Query 97090 TGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAA 97149
||||| ||||||||| | | || ||| ||||| ||||| || || | | |
Sbjct 7638 TGAATGAATTCTCCACAGTCCATGTCGACGACGTGGGCAATCATCTTGGTCAACAATGCA 7697
Query 97150 TAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGA 97209
|| |||||| || || || || || | ||||| ||| ||||||||||| || |
Sbjct 7698 TAAGAAGCAATATTGAATGGAACACCCAAGCCCATGTCACAAGATCTTTGATACAATAAA 7757
Query 97210 CAGGAAAGCTT 97220
||||| |||||
Sbjct 7758 CAGGATAGCTT 7768
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346776083896610
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |