Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06- 03] 1,873 sequences; 16,614,112 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1163 109 4e-19 >seq1163 Length=41016 Score = 109 bits (120), Expect = 4e-19 Identities = 208/304 (68%), Gaps = 2/304 (1%) Strand=Plus/Minus Query 20140 GAAAAAGGAGTTAAGATTTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGA 20199 |||||||| || ||||||||| | |||| ||| ||| ||| ||| ||| Sbjct 8137 GAAAAAGGTGTCAAGATTTGGGAAGGTAATGGTTCTCGTGAATATTTGGACAATTTGGGA 8078 Query 20200 TTTGACAACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTT 20259 || | |||| ||| || ||||| ||||| || ||||| || ||||||||||||||| Sbjct 8077 TTAACTGATCGTCGAGAAGGTGATTTAGGTCCGGTTTATGGGTTCCAATGGAGACATTTT 8018 Query 20260 GGAGCTGAATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAA 20319 |||||||| ||| || | || ||||| ||| |||||| || |||||||| Sbjct 8017 GGAGCTGAGTATAAAGATTGTGATACTGATTATACTGGTCAAGGATATGACCAATTACAC 7958 Query 20320 AATGTTATTAATTTAATTAAA-ACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTG 20378 | || | ||| ||||||| || || ||| | || |||||||||||| | | || || Sbjct 7957 GACGTGA-TAAAAAAATTAAAGACAAATCCATATGATAGAAGAATTATTATGTCTGCTTG 7899 Query 20379 GAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTA 20438 ||| | ||| | | |||||| | || ||||||||| | | || ||||| || Sbjct 7898 GAATCCGCCTGATTTTGCAAAGATGGCTCTTCCACCATGTCATGTCTTCTGTCAATTCTA 7839 Query 20439 CGTT 20442 ||| Sbjct 7838 TGTT 7835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399174887751985