Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq1163 109 4e-19
>seq1163
Length=41016
Score = 109 bits (120), Expect = 4e-19
Identities = 208/304 (68%), Gaps = 2/304 (1%)
Strand=Plus/Minus
Query 20140 GAAAAAGGAGTTAAGATTTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGA 20199
|||||||| || ||||||||| | |||| ||| ||| ||| ||| |||
Sbjct 8137 GAAAAAGGTGTCAAGATTTGGGAAGGTAATGGTTCTCGTGAATATTTGGACAATTTGGGA 8078
Query 20200 TTTGACAACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTT 20259
|| | |||| ||| || ||||| ||||| || ||||| || |||||||||||||||
Sbjct 8077 TTAACTGATCGTCGAGAAGGTGATTTAGGTCCGGTTTATGGGTTCCAATGGAGACATTTT 8018
Query 20260 GGAGCTGAATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAA 20319
|||||||| ||| || | || ||||| ||| |||||| || ||||||||
Sbjct 8017 GGAGCTGAGTATAAAGATTGTGATACTGATTATACTGGTCAAGGATATGACCAATTACAC 7958
Query 20320 AATGTTATTAATTTAATTAAA-ACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTG 20378
| || | ||| ||||||| || || ||| | || |||||||||||| | | || ||
Sbjct 7957 GACGTGA-TAAAAAAATTAAAGACAAATCCATATGATAGAAGAATTATTATGTCTGCTTG 7899
Query 20379 GAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTA 20438
||| | ||| | | |||||| | || ||||||||| | | || ||||| ||
Sbjct 7898 GAATCCGCCTGATTTTGCAAAGATGGCTCTTCCACCATGTCATGTCTTCTGTCAATTCTA 7839
Query 20439 CGTT 20442
|||
Sbjct 7838 TGTT 7835
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399174887751985
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |