Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06- 03] 1,873 sequences; 16,614,112 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq1387 381 6e-101 >seq1387 Length=15432 Score = 381 bits (422), Expect = 6e-101 Identities = 651/933 (70%), Gaps = 17/933 (2%) Strand=Plus/Plus Query 13895 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTA 13954 |||| ||||| || |||||||| ||| |||||| |||||||| |||||||||||| Sbjct 2184 TTAGCCATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTTA 2243 Query 13955 CCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATC 14013 || | | ||| |||||||||||||| |||||||||||| | |||| | | || || | Sbjct 2244 CCAGCTAATGAAATATTTTCCATAAAGTCAAATGGATTT-TGAACATTATAAACCTTCTT 2302 Query 14014 ACAACCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATC 14073 | ||| | | | | || |||||| || |||| || |||| ||||||| |||| || | Sbjct 2303 ATTACCAAATGCAACTAATAATCTGTCGGCAACAAATTCAACATATTGACACATCAATTT 2362 Query 14074 ACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGA 14133 ||| |||||||||| || | || || | | || || ||| |||||||||| ||| Sbjct 2363 ACAGTTCATACCTAATAAACTAACTGGTAATGCATCAGTGAAATATTCTTTTTCAATATC 2422 Query 14134 CACAGCCTCGTTTATAATAATCGTA---ATAATTTCATTAGAAGGAGGATATTTTAGATG 14190 ||||| || | ||||||| | | ||||| | || || || | ||| Sbjct 2423 AACAGCTTCA---ACAATAATCTTTTCCACGATTTCTGGATCTGGTCTATTGTTCAAATG 2479 Query 14191 TTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTT 14250 ||| | |||||| ||||||||| ||| | || |||||||||| ||| | ||| || Sbjct 2480 AGCAAATAATAAACAAGCAAAATCAGTATGTAACCCTTCATCTCTACAAATTAATTCATT 2539 Query 14251 TGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGA 14310 ||| || ||||| |||||||| || |||| ||| |||||||| || |||| || ||||| Sbjct 2540 TGAGAAAGTTAAACCTGGCATTAACCCTCTTTTCTTTAACCAGAAAATTGAGGCAAATGA 2599 Query 14311 TCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGC 14370 ||| |||||| || || ||||| |||||||| || | ||||| ||| || | | | Sbjct 2600 TCCACTAAAGAAAATACCTTCAACAGCAGCAAATGCAACTAATCTTTCAGCATATAAGAC 2659 Query 14371 TTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGT 14430 || | | | |||||| || ||||| |||| |||| || | ||| || || Sbjct 2660 TTCAGTATCAGTGATCCATCTTAATGCCCAATCAGCTTTTCTTCTGATACAAGGAATATG 2719 Query 14431 TTCAATAGCATTAAATAAATGTTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATA 14488 |||||||||||||||||| | || |||| |||| | ||| ||| || |||||||| Sbjct 2720 TTCAATAGCATTAAATAAGTAATCAGCTTC-CTTTGGATCTT-TAATATAAGTATCAATT 2777 Query 14489 AGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACAT 14548 | | | ||| ||||||| || || ||||| || || ||||| ||||| || || Sbjct 2778 AAAAGGGAATAAGTTTCAGAATGAATATTTTCAATCATAATTTGAAACCCATAGAATGAT 2837 Query 14549 CTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATA 14608 ||||||||| ||| || |||| |||| |||| |||||||||||||| ||| Sbjct 2838 TTAGCTTCTGGAATTTGAACTTCTGCTGAAAAATTTTCAATTAAATTTTCATTAACAATA 2897 Query 14609 CCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTG 14668 |||||| || ||||| ||||| || | || ||| || ||| || |||| | Sbjct 2898 CCATCAGATGCAGCAAAGAATGCTAAGACTCTTGAAATGAAATATCTTTCATCATCATTC 2957 Query 14669 AGTTT---TTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAA 14725 | ||| | ||||||| |||||||||| | ||| | ||| ||| | |||||||| Sbjct 2958 AATTTATCTCTCCAATCATGTAAATCCTTACTTAAATCAATTTCTTCAGCAGTCCAAAAT 3017 Query 14726 CTAGCAACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACA 14785 || | ||||| || || | | ||| ||||| | |||| || ||||| | ||| Sbjct 3018 GATGCTTCTGCTTTCTTGTAAAATTGCCAAATTTCATGATATCTAATTGGAAACATAACA 3077 Query 14786 AATCT-TGAAGATGTTTCTTTAAGAATTGGTTC 14817 ||||| | ||| || ||| ||| | |||||| Sbjct 3078 AATCTACGTGGATTTTCCTTCAAG-AGTGGTTC 3109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482334307083640