Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq1387 381 6e-101
>seq1387
Length=15432
Score = 381 bits (422), Expect = 6e-101
Identities = 651/933 (70%), Gaps = 17/933 (2%)
Strand=Plus/Plus
Query 13895 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTA 13954
|||| ||||| || |||||||| ||| |||||| |||||||| ||||||||||||
Sbjct 2184 TTAGCCATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTTA 2243
Query 13955 CCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATC 14013
|| | | ||| |||||||||||||| |||||||||||| | |||| | | || || |
Sbjct 2244 CCAGCTAATGAAATATTTTCCATAAAGTCAAATGGATTT-TGAACATTATAAACCTTCTT 2302
Query 14014 ACAACCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATC 14073
| ||| | | | | || |||||| || |||| || |||| ||||||| |||| || |
Sbjct 2303 ATTACCAAATGCAACTAATAATCTGTCGGCAACAAATTCAACATATTGACACATCAATTT 2362
Query 14074 ACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGA 14133
||| |||||||||| || | || || | | || || ||| |||||||||| |||
Sbjct 2363 ACAGTTCATACCTAATAAACTAACTGGTAATGCATCAGTGAAATATTCTTTTTCAATATC 2422
Query 14134 CACAGCCTCGTTTATAATAATCGTA---ATAATTTCATTAGAAGGAGGATATTTTAGATG 14190
||||| || | ||||||| | | ||||| | || || || | |||
Sbjct 2423 AACAGCTTCA---ACAATAATCTTTTCCACGATTTCTGGATCTGGTCTATTGTTCAAATG 2479
Query 14191 TTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTT 14250
||| | |||||| ||||||||| ||| | || |||||||||| ||| | ||| ||
Sbjct 2480 AGCAAATAATAAACAAGCAAAATCAGTATGTAACCCTTCATCTCTACAAATTAATTCATT 2539
Query 14251 TGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGA 14310
||| || ||||| |||||||| || |||| ||| |||||||| || |||| || |||||
Sbjct 2540 TGAGAAAGTTAAACCTGGCATTAACCCTCTTTTCTTTAACCAGAAAATTGAGGCAAATGA 2599
Query 14311 TCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGC 14370
||| |||||| || || ||||| |||||||| || | ||||| ||| || | | |
Sbjct 2600 TCCACTAAAGAAAATACCTTCAACAGCAGCAAATGCAACTAATCTTTCAGCATATAAGAC 2659
Query 14371 TTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGT 14430
|| | | | |||||| || ||||| |||| |||| || | ||| || ||
Sbjct 2660 TTCAGTATCAGTGATCCATCTTAATGCCCAATCAGCTTTTCTTCTGATACAAGGAATATG 2719
Query 14431 TTCAATAGCATTAAATAAATGTTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATA 14488
|||||||||||||||||| | || |||| |||| | ||| ||| || ||||||||
Sbjct 2720 TTCAATAGCATTAAATAAGTAATCAGCTTC-CTTTGGATCTT-TAATATAAGTATCAATT 2777
Query 14489 AGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACAT 14548
| | | ||| ||||||| || || ||||| || || ||||| ||||| || ||
Sbjct 2778 AAAAGGGAATAAGTTTCAGAATGAATATTTTCAATCATAATTTGAAACCCATAGAATGAT 2837
Query 14549 CTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATA 14608
||||||||| ||| || |||| |||| |||| |||||||||||||| |||
Sbjct 2838 TTAGCTTCTGGAATTTGAACTTCTGCTGAAAAATTTTCAATTAAATTTTCATTAACAATA 2897
Query 14609 CCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTG 14668
|||||| || ||||| ||||| || | || ||| || ||| || |||| |
Sbjct 2898 CCATCAGATGCAGCAAAGAATGCTAAGACTCTTGAAATGAAATATCTTTCATCATCATTC 2957
Query 14669 AGTTT---TTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAA 14725
| ||| | ||||||| |||||||||| | ||| | ||| ||| | ||||||||
Sbjct 2958 AATTTATCTCTCCAATCATGTAAATCCTTACTTAAATCAATTTCTTCAGCAGTCCAAAAT 3017
Query 14726 CTAGCAACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACA 14785
|| | ||||| || || | | ||| ||||| | |||| || ||||| | |||
Sbjct 3018 GATGCTTCTGCTTTCTTGTAAAATTGCCAAATTTCATGATATCTAATTGGAAACATAACA 3077
Query 14786 AATCT-TGAAGATGTTTCTTTAAGAATTGGTTC 14817
||||| | ||| || ||| ||| | ||||||
Sbjct 3078 AATCTACGTGGATTTTCCTTCAAG-AGTGGTTC 3109
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482334307083640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |