Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06- 03] 1,873 sequences; 16,614,112 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq1840 84.2 3e-11 >seq1840 Length=120634 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/158 (73%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 73950 AATAGACAACCTACTTTACATAAAGCATCAATGATGGCTCTTCGAGTTAAAATTATGG-A 74008 ||| | |||||| | ||||||||| || |||||||| | | |||||||| ||||| | Sbjct 100104 AATCGTCAACCTTCATTACATAAAATGTCGATGATGGCACATAGAGTTAAAGTTATGCCA 100163 Query 74009 TGTAAAAACCTTTAAATTTAATCTTGCATGCACTAAACCATATAATGCAGATTTTGATGG 74068 | | || | || | ||| ||| | || |||| || |||||||| ||||| ||||| Sbjct 100164 TATTCAA-CTTTCAGATTAAATTTATCAGTCACTTCTCCGTATAATGCTGATTTCGATGG 100222 Query 74069 AGATGAAATGAATGCTCATGCGCCTCAATCAGAAGAAA 74106 |||||||||||| |||| || ||||| ||||| Sbjct 100223 TGATGAAATGAATTTACATGTTCCACAATCTCCAGAAA 100260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679798483845360