Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq1387 152 1e-31
seq1163 113 9e-20
>seq1387
Length=15432
Score = 152 bits (168), Expect = 1e-31
Identities = 305/448 (68%), Gaps = 23/448 (5%)
Strand=Plus/Minus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
||||| |||||||| |||||||| || ||||||||||| |||| || || |||||||||
Sbjct 2638 GTTGCATTTGCTGCTGTTGAAGGTATTTTCTTTAGTGGATCATTTGCCTCAATTTTCTGG 2579
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| ||||| || || | |||| ||| | || | ||| ||||| || |||| ||| ||
Sbjct 2578 TTAAAGAAAAGAGGGTTAATGCCAGGTTTAACTTTCTCAAATGAATTAATTTGTAGAGAT 2519
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
||||| | ||| || ||||| || | | || | ||| ||| |||
Sbjct 2518 GAAGGGTTACATACTGATTTTGCTTGTTTATTATTTGCTCA---TTTGAACAATAGACCA 2462
Query 102098 --TCAAGA-------GAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAA 102148
|| ||| |||| |||| ||||| |||||| || |||||| ||
Sbjct 2461 GATCCAGAAATCGTGGAAAAGATT------ATTGT---TGAAGCTGTTGATATTGAAAAA 2411
Query 102149 GAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGC 102208
|||| | |||| | | | | || |||| ||| | || |||||||| || |||||| |
Sbjct 2410 GAATATTTCACTGATGCATTACCAGTTAGTTTATTAGGTATGAACTGTAAATTGATGTGT 2351
Query 102209 CAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG-ACTAGAAAAGCACTA 102267
|| || |||||||||| || || | | |||| |||| | | || | || | ||| ||
Sbjct 2350 CAATATGTTGAATTTGTTGCCGACAGATTATTAGTTGCATTTGGTAATA-AGAAGGTTTA 2292
Query 102268 TAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTT 102327
||||||| || || || || ||||| |||||||| | | ||| || |||||
Sbjct 2291 TAATGTTCAAAATCCATTTGACTTTATGGAAAATATTTCATTAGCTGGTAAAACTAACTT 2232
Query 102328 TTTTGAAAAGAGAGTCGCCGAGTATCAA 102355
||||||||||||||| | || ||||||
Sbjct 2231 TTTTGAAAAGAGAGTTTCTGATTATCAA 2204
>seq1163
Length=41016
Score = 113 bits (124), Expect = 9e-20
Identities = 204/291 (70%), Gaps = 8/291 (3%)
Strand=Plus/Minus
Query 35333 ATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCA 35392
|| ||| | | |||||| || || |||| |||||||| | || ||| ||| | |
Sbjct 8122 ATTTGGGAAGGTAATGGTTCTCGTGAATATTTGGACAATTTGGGATTAACTGATCGTCGA 8063
Query 35393 GAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGAT 35452
|| || ||||| || || || || || ||||||||| | |||||||| ||||| ||| |
Sbjct 8062 GAAGGTGATTTAGGTCCGGTTTATGGGTTCCAATGGAGACATTTTGGAGCTGAGTATAAA 8003
Query 35453 ACCTGTTCTTCCGATTATACTGG-AAAGGGTATTGATCAATTGGCCAATATACTAAAGAC 35511
||| | | ||||||||||| |||| || ||| ||||| | | | |||| |
Sbjct 8002 GATTGTGATACTGATTATACTGGTCAAGGATA-TGACCAATTACACGACGTGATAAA-AA 7945
Query 35512 CCTGAGAGA-AAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATC 35570
| | ||| ||||||| |||||||||| || |||||| | || |||||||| |||
Sbjct 7944 AATTAAAGACAAATCCATATGATAGAAGAATTATTATGTCTGCTTGGAATCCGCCTGATT 7885
Query 35571 TTCACCTTATGGCTCTTCCTCCATGCCACATGACTGC--TCAATTTTATGT 35619
|| ||||||||||| ||||| |||| || | |||||| |||||
Sbjct 7884 TTGCAAAGATGGCTCTTCCACCATG--TCATGTCTTCTGTCAATTCTATGT 7836
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989560252148715
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |