Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq1308 520 1e-142
seq1387 378 9e-100
seq1180 116 5e-21
>seq1308
Length=6085
Score = 520 bits (576), Expect = 1e-142
Identities = 1416/2144 (66%), Gaps = 54/2144 (3%)
Strand=Plus/Plus
Query 64835 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 64893
|||| || |||||||| | ||| || || | || || | || ||| ||||| || || |
Sbjct 3385 CAATAGTAAATTGAATAGCAGCAGAAGCAGCTTGAGTTCTTAAATAATACATACCAGTCT 3444
Query 64894 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 64953
| | || |||| ||||| ||||||||||| || | ||| | || ||
Sbjct 3445 TCAACCCCTTCTTCCAACCGTAGAAATGCATACTGGTCAATTTACCCATTGTTGGGTCCT 3504
Query 64954 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 65013
||||||||||||| ||||||| |||||| ||||| ||| | || || |||||||| |
Sbjct 3505 TAATATGGATATTCAAAGATTGAGATTGATCAATGAATGCTGCTCTATCAGCAGCCATAT 3564
Query 65014 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTG 65073
|| || ||||| | ||||||||| | || ||||| | ||||| || || |
Sbjct 3565 CAATAATATGTTTTTGAGAAATTTCCCATACTGTCTTATATAAGGCTTTAATTTCATCAG 3624
Query 65074 GAAGGTTTG-TATTC--TGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCAT 65130
| | || | || | |||||||| ||| || || ||||| ||| | || | | |
Sbjct 3625 GGATATTAGGTAATGATTGAATGGACCCATTATTTGAAATAATACTACTTTTAACGGCTT 3684
Query 65131 CATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATT 65190
||||||| | | || |||| |||| | | | |||||||| | ||| ||||
Sbjct 3685 CATTCCAAATACCTAAATCAACTAAATCTCTTAATAAAAATGGATTAACAATTTGGAATT 3744
Query 65191 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTAT 65250
| |||| | ||||| | | ||||| || ||||| ||||| | | | |||||||
Sbjct 3745 CACCAGCAAGAACTCTTCTGGAATAAATGTTTGAAGTATATGGTTCAAAACATTCATTAT 3804
Query 65251 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 65310
| ||||| ||||| | ||||| ||||| |||||||| || ||||| | ||||| |
Sbjct 3805 TACCCAAGATTTGTGATGTTGAAGCAGTTGGCATAGGAGCAACCAAAAGTGAGTTTCTTA 3864
Query 65311 GACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTAC 65368
|| ||| | || || || | ||||| || ||||||| ||| | || | |||
Sbjct 3865 ATCC--ATGCTTTGCCATATTTTGTTTTAAAGTATCCCAATCCCATAATTCAGTTGGTTT 3922
Query 65369 AACNNNNNNNNNNNNNNNTTGTAGAATACCGT----TACTGGCGTACGATCCTACATATG 65424
||||| | || | | |||| | || || ||| |
Sbjct 3923 TCTATTCCATAAATCATATTGTAATAACCCTTGGGATGCTGGTGAAC----CTTGATAAG 3978
Query 65425 TATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAA 65484
| ||||| ||||| | | |||| |||| | | || | ||| ||| ||||
Sbjct 3979 ATTGATATGGACCTTCTTCTTGGGCTAATTCAATAGAAGTTTCAACAGCAGCGTGGTAAA 4038
Query 65485 TGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTA 65544
||||||| || || | |||||| ||| ||||| | ||||||||| |||| |
Sbjct 4039 TGGTTTCAAAAATTTGAATATTTAATTCTCTGGCTTCTTGAGAATCAAATGG-TAATCTT 4097
Query 65545 AGAGA-ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 65603
| || || || || || || || ||||| || || | | | || ||||||| | || ||
Sbjct 4098 AAAGCCATGAAAGCATCAGCCAAACCTTGGACCCCCAAAGCAATTGGTCTATTTTTCATA 4157
Query 65604 TTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 65663
|| || ||| |||||||||| ||||||||||||| ||| |||| |||||| | |||
Sbjct 4158 TTTGAATTTTTGGCTTCTGGAACAGGATAATAATTACGATCAATAACTTTATTTAAATTA 4217
Query 65664 C---TGACAAT-----TACTTTGACCACATCCTTCAGTTTGAGAAAATCAA--ATCGCTC 65713
| | ||||| || ||| | || ||| | | | || || ||| ||
Sbjct 4218 CGAGTAACAATCTTGGTAATTTCATGTAATTTATCAAAATTATACCATGAATGATCA-TC 4276
Query 65714 ATCTATT---ACAAACA-TGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCAT 65769
|||| || |||||| || | || || | || || | |||||| || || || || |
Sbjct 4277 ATCTTTTTCAACAAACGCTGGT-AAGGCGATTGAAGCTAAATTACAGACAGCAACTTCTT 4335
Query 65770 TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 65829
|| | ||||| | || ||| || | ||| | || || | |||||||
Sbjct 4336 CAGGTGATGAATATTCAACAATTTCACAACATAAGTTAGATGATTTAATAATACCTAAAT 4395
Query 65830 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTT 65889
| | |||||| |||||| ||||| ||||| ||||| | || ||||||||||||||||
Sbjct 4396 TCTTTTGATTGGTCTTTTCATTACAAGCATCTTTATATAACATAAATGGAGTACCAGTTT 4455
Query 65890 CAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATT-TGTAT 65948
|| | || | ||||| ||| | | ||| | | | ||||| || || || | ||
Sbjct 4456 CAGTTTGGGCTTCTAAAATGGAATACCATAATTTTTGTGCCTTAAT---AGTTTGTCTAC 4512
Query 65949 CTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGT 66006
| | ||| | ||| ||| | ||| ||| |||| || || || || ||||||
Sbjct 4513 CACGACCTTCACGTTCATATTTTTCATATAATTGTTCAAATTCTTCACCATAAACATCAG 4572
Query 66007 CCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 66066
||||||||| ||||| || | | || | ||| || || | | | ||| || |
Sbjct 4573 GTAATCCAGGAGCTTCATTAGGGGAAAATAATGTCCAATCACCATTTTGTTCCACACGCT 4632
Query 66067 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGT 66126
||||||| | |||||||||||| | ||| ||||||||||||| |||| ||| || |
Sbjct 4633 TCATAAATAAATCAGGAATCCATAATGCTGGGAATAAATCTCTGGCTCTAATTTCTTCTT 4692
Query 66127 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGT 66186
| ||| ||| ||| ||| ||| | || | | |||||| ||||||| ||||| || |
Sbjct 4693 TACCTTGATTTTTTCTAATATCAATAAAATCAAAAATATCTGAATGCCATGGTTCTAAAT 4752
Query 66187 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 66246
| | ||| | | | || || | || || || || ||||| | || | |||||||| |
Sbjct 4753 AGAGGGCAAAAGCACCTGGTCTCTTATTACCACCTTGATCGACATAACGTGCGGTGTTGT 4812
Query 66247 TATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGC 66306
| |||| | | ||| || |||||||| ||||| |||||||| || || | |||||
Sbjct 4813 TGAAAACACGTACCATGGGGATAATACCGTTGGAAGTACCATTAGTACCAGCAATATAAG 4872
Query 66307 TTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 66366
||| | | |||||||||| ||| || ||| || || || || | || || || |
Sbjct 4873 CCCCAGTAGAACGAATATTATGAATATGTAAACCAATACCACCAGCACTCTTTGAAATCA 4932
Query 66367 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 66426
|||| ||| ||| || |||||||| || || || || |||||| ||||| || ||
Sbjct 4933 ATGCACATGTTTTCAAAGTATCATAAATCCCATCAATTGAATCATCTTTCATGGCAACTA 4992
Query 66427 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 66486
||||| |||||||| ||| || || ||||||||||| || || ||| | |
Sbjct 4993 AGAAACATGACGACATTTGTGGACTTGGGGTACCGGCATTAAATAAAGTTGGTGAACCAT 5052
Query 66487 GCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT-GAGTCTATATCCCAT 66545
| || || | |||| || | | ||| || | |||||| || ||| |||||||
Sbjct 5053 GAGTGAAAAACTTTTGTGACATCATATTATAAGATTCAATAACTCGAG-GGATATCCCTA 5111
Query 66546 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTG 66605
|||||| || | ||| || | ||| | | || || ||||||||| | | ||
Sbjct 5112 CCATGAATACCAATTGCCACTCTCATGATTAAATGTTGTGGTCTTTCAGCAACTTTACCA 5171
Query 66606 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAA 66663
|| | | | || || || ||| |||| ||||||||||| |||||||| || || |||||
Sbjct 5172 TTAACTCTTAATAAATAAGATCTTTCTAAAGTTTTAAATCCAAAATAATTATAATTGAAA 5231
Query 66664 AGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCA 66723
|| || ||||||| |||| | || || | || ||| || || || | || ||
Sbjct 5232 --TCACGATCGTAAACAATAGCTGAATTTAATTCATCGGCATGTTCACAAATAATAT-CA 5288
Query 66724 TGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAAT 66782
| | ||| ||||| || ||||||||||| | | || || || ||||| | ||
Sbjct 5289 TAAGTCTCCTTGGAAATCATAGGAGAATGTTTATCGGTCTTGGGGTTAACATAATCATAT 5348
Query 66783 AAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCT 66842
|| || | | |||| | | || |||| | |||| ||| |||| ||| ||||| ||
Sbjct 5349 AATTCTTTACTAACTTGAGAATATTGTTTGGTAGTTTGTTTATGTAAATTAGATACAGCA 5408
Query 66843 ATTCTAGCGGCTATAATGGCATAATCCGGATG--TTGT-GTAGTACAAGTGGCTGCTATT 66899
|||||||| |||| |||||||||||| ||||| | || || || || || || ||
Sbjct 5409 ATTCTAGCAGCTAAAATGGCATAATCAGGATGAATAGTGGTCATATAA---GCAGCAGTT 5465
Query 66900 TCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 66943
||||| || | | || ||||| ||||| ||||| |||| |||
Sbjct 5466 TCGGCAGCTAAGTTATCTAATTCAACCGTGGTTACACCATGATA 5509
>seq1387
Length=15432
Score = 378 bits (418), Expect = 9e-100
Identities = 645/929 (69%), Gaps = 10/929 (1%)
Strand=Plus/Plus
Query 35848 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTT 35907
|| || |||||| || ||||| || ||| || | ||||| ||||| ||||||||
Sbjct 2183 TTTAGCCATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTT 2242
Query 35908 ACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAttttttt 35967
||| ||||||| ||||||||||| || || |||||||| ||||||||||| || ||
Sbjct 2243 ACCAGCTAATGAAATATTTTCCATAAAGTCAAATGGATTTTGAACATTATAAACCTTCTT 2302
Query 35968 AAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTC 36027
| || ||| || | ||||| || || |||||||| | |||| ||||| ||
Sbjct 2303 ATTACCAAATGCAACTAATAATCTGTCGGCAACAAATTCAACATATTGACACATCAATTT 2362
Query 36028 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGA 36087
||| ||||| |||| | ||||||| | || |||| | | |||||| |||||||
Sbjct 2363 ACAGTTCATACCTAATAAACTAACTGGTAATGCATCAGTGAAATATTCTTTTTCAATATC 2422
Query 36088 GACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTT 36147
|| || || ||||| | || ||||| | ||| || |||||
Sbjct 2423 AACAGCTTCAACAATAATCTTTTCCACGATTTCTGGATCTGGTCTATTGTTCAAATGAGC 2482
Query 36148 AAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGA 36207
||| | ||||| || ||||| |||| || || ||||||| ||||||||| || ||
Sbjct 2483 AAATAATAAACAAGCAAAATCAGTATGTAACCCTTCATCTCTACAAATTAATTCATTTGA 2542
Query 36208 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCC 36267
|| || | || ||||||| || | || || | ||| || || || |||||||||||
Sbjct 2543 GAAAGTTAAACCTGGCATTAACCCTCTTTTCTTTAACCAGAAAATTGAGGCAAATGATCC 2602
Query 36268 AGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC--- 36324
| ||||||||| ||||| || || ||||| |||| | ||| || |||| | |
Sbjct 2603 ACTAAAGAAAATACCTTCAACAGCAGCAAATGCAACTAATCTTTCAGCATATAAGACTTC 2662
Query 36325 ACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT-TGTCT 36383
| | ||| ||||| || |||||||| || || || | | |||||| || ||| |
Sbjct 2663 AGTATCAGTGATCCATCTTAATGCCCAATCAGCTTTTCTTCTGATACAAGGAATATGT-T 2721
Query 36384 CTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAA 36443
| ||||||||||| | || | ||| || |||||||| ||| |||||||| ||||
Sbjct 2722 CAATAGCATTAAATAAGTAATCAGCTTCCTTTGGATCTTTAATATAAGTATCAATTAAAA 2781
Query 36444 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAG 36503
| ||| |||| |||||||| |||||||| |||||||| || ||||| || |||
Sbjct 2782 GGGAATAAGTTTCAGAATGAATATTTTCAATCATAATTTGAAACCCATAGAATGATTTAG 2841
Query 36504 CCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGT 36563
| || | ||| || ||||||| |||| ||| |||||||||||| || || || |
Sbjct 2842 CTTCTGGAATTTGAACTTCTGCTGAAAAATTTTCAATTAAATTTTCATTAACAATACCAT 2901
Query 36564 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTT 36623
|| || ||||| || || || || | || |||||| |||| | | | ||
Sbjct 2902 CAGATGCAGCAAAGAATGCTAAGACTCTTGAAATGAAATATCTTTCATCATCATTCAATT 2961
Query 36624 TAT---TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATG 36680
||| ||||||||| | ||| ||| || ||| | |||||| | |||||||||||||
Sbjct 2962 TATCTCTCCAATCATGTAAATCCTTACTTAAATCAATTTCTTCAGCAGTCCAAAATGATG 3021
Query 36681 CCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATC 36740
| ||||| || || || | | ||| || ||||||||| ||||||||| ||||||||||
Sbjct 3022 CTTCTGCTTTCTTGTAAAATTGCCAAATTTCATGATATCTAATTGGAAACATAACAAATC 3081
Query 36741 TATTTTGATTTT-TTGCAAGGATTGGTTC 36768
|| | |||||| | ||| || ||||||
Sbjct 3082 TACGTGGATTTTCCTTCAA-GAGTGGTTC 3109
>seq1180
Length=50914
Score = 116 bits (128), Expect = 5e-21
Identities = 304/459 (66%), Gaps = 6/459 (1%)
Strand=Plus/Minus
Query 65812 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 65871
|||| ||| || ||||| | |||||| |||| ||||| |||||||| ||||| |
Sbjct 28127 ACTTTATGACCCCCAAATTCTTTTGATTTGATTTTTCATTACAAGCATCCTTGTAAAGCA 28068
Query 65872 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 65931
| |||| |||||| || | || ||||||| || || |||| | | ||||
Sbjct 28067 TATATGGGCCACCAGTCTCGGTTTGGGATTCTAATATAGCCATCCATAGTTTATGTGCCT 28008
Query 65932 TTATTATAGATTTGTATCTCTTT--TCTCTTTCGTATAGTGTATACAATCGTTCGAACTC 65989
| | |||| | || | |||||||||||| ||| ||| | |||||||
Sbjct 28007 TGACGGTAGACAC--AGCTAATCCCTCTCTTTCGTATCTCTCATATAATTGGACGAACTC 27950
Query 65990 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 66049
||| || || || |||||| || |||| ||| | | |||||||| || |
Sbjct 27949 GTCGCCATAACAATCACTCAATCCTGGTGCAACATCTGGAGAAAATAACGACCAGTCCGC 27890
Query 66050 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAAATCTC 66108
||| || |||||||| |||| || | |||||| | ||| | | | ||| |||||||| |
Sbjct 27889 GTCTTCTTTCACTCGCCTCATGAATAAATCAGGCACCCATA-ATCCATAGAATAAATCCC 27831
Query 66109 TGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAT 66168
| ||||| || || || || || ||| ||| | | ||| | | | | |||||
Sbjct 27830 TAGTTCTTTGCTCTTCATTACCATGATTTTTTCTCATATCTAAAATATCAAAGATATCGC 27771
Query 66169 AATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTA 66228
|||||| || || | ||||| || | | || |||||||| || || |||||||
Sbjct 27770 CATGCCAAGGCTCTATATATATAGCGAATGCCCCCGGCCGTTTACCACCACCTTGATCTA 27711
Query 66229 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAA 66267
||||| || ||||| ||| | || | | ||||||||
Sbjct 27710 CATATCTTGCAGTGTTGTTAAACACGCGGAGCATTGGAA 27672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658157390529320
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