Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq1308 535 6e-147
seq1387 340 2e-88
seq1180 107 3e-18
>seq1308
Length=6085
Score = 535 bits (592), Expect = 6e-147
Identities = 1410/2135 (66%), Gaps = 36/2135 (2%)
Strand=Plus/Plus
Query 70797 CAAT-GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTT 70855
|||| ||||| ||||| | || || || |||| || | || ||| ||||| || || |
Sbjct 3385 CAATAGTAAATTGAATAGCAGCAGAAGCAGCTTGAGTTCTTAAATAATACATACCAGTCT 3444
Query 70856 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAGGATCG 70914
| | || |||| ||||| ||||||||||| || | ||| || | | || ||
Sbjct 3445 TCAACCCCTTCTTCCAACCGTAGAAATGCATACTGGTCAATTTACCCATTGTTGGG-TCC 3503
Query 70915 GCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 70974
|| || ||||||| || ||| |||||| ||||| ||| | || || ||||||||
Sbjct 3504 TTAATATGGATATTCAAAGATTGAGATTGATCAATGAATGCTGCTCTATCAGCAGCCATA 3563
Query 70975 TTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCT 71034
| || || ||||| | ||||||||| | || ||||| | ||||| || ||
Sbjct 3564 TCAATAATATGTTTTTGAGAAATTTCCCATACTGTCTTATATAAGGCTTTAATTTCATCA 3623
Query 71035 GGAAGGTTTG-TATTC--TGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCT 71091
|| | || | || | |||||||| ||| || || |||||| ||| |||| | ||
Sbjct 3624 GGGATATTAGGTAATGATTGAATGGACCCATTATTTGAAATAATACTACTTTTAACGGCT 3683
Query 71092 TCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAAT 71151
|||||||| | | || |||| |||| | | | |||||||| | ||| |||
Sbjct 3684 TCATTCCAAATACCTAAATCAACTAAATCTCTTAATAAAAATGGATTAACAATTTGGAAT 3743
Query 71152 TCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTA 71211
|| |||| | ||||| | | ||||| || ||||| ||||| | | ||||||
Sbjct 3744 TCACCAGCAAGAACTCTTCTGGAATAAATGTTTGAAGTATATGGTTCAAAACATTCATTA 3803
Query 71212 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTA 71271
|| ||||| ||||| | ||||| ||||| |||||||| || ||||| || |||||
Sbjct 3804 TTACCCAAGATTTGTGATGTTGAAGCAGTTGGCATAGGAGCAACCAAAAGTGAGTTTCTT 3863
Query 71272 AGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGGTACA 71331
| ||||| | || || | ||||| || ||||||| ||| | || | ||||
Sbjct 3864 AATCCATGCTTTGCCATATTTTGTTTTAAAGTATCCCAATCCCATAATTCAGTTGGTTTT 3923
Query 71332 ACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATATGTATCG 71391
| || | || ||| ||| ||| | |
Sbjct 3924 CTATTCCATAAATCATATTGTAATAACCCTTGGGATGCTGGTGAACCTTGATAAGATTGA 3983
Query 71392 TATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTT 71451
||||| ||||||| || ||||| |||| | | || | || | | |||||||||
Sbjct 3984 TATGGACCTTCTTCTTGGGCTAATTCAATAGAAGTTTCAACAGCAGCGTGGTAAATGGTT 4043
Query 71452 TCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGA 71511
|| ||||| | |||| | ||| ||||| | ||||||||| |||| | | ||
Sbjct 4044 TCAAAAATTTGAATATTTAATTCTCTGGCTTCTTGAGAATCAAATGG-TAATCTTAAAGC 4102
Query 71512 -ATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGA 71570
|| || || || || || ||||| || || | | | || ||||| | | || |||| ||
Sbjct 4103 CATGAAAGCATCAGCCAAACCTTGGACCCCCAAAGCAATTGGTCTATTTTTCATATTTGA 4162
Query 71571 AATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGAC 71630
| ||| |||||||||| ||||||||||||| ||| |||| |||||| | ||| | ||
Sbjct 4163 ATTTTTGGCTTCTGGAACAGGATAATAATTACGATCAATAACTTTATTTAAATTAC-GAG 4221
Query 71631 TATTACT-TTGACCACATCCTTTAGTTTGAGAAAATCAAATC--------TCC-CATCTA 71680
|| | | ||| | || | || ||| ||||| | | | || |||||
Sbjct 4222 TAACAATCTTGGTAATTTCATGTAATTTATCAAAATTATACCATGAATGATCATCATCTT 4281
Query 71681 TTACAA-ACACGTTC--AAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCAT 71737
|| ||| | ||| | ||||| | || || | |||||| || || || || | ||
Sbjct 4282 TTTCAACAAACGCTGGTAAGGCGATTGAAGCTAAATTACAGACAGCAACTTCTTCAGGTG 4341
Query 71738 CGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTT 71797
| ||||| | ||||||| || | ||| | || || | |||||||| | ||
Sbjct 4342 ATGAATATTCAACAATTTCACAACATAAGTTAGATGATTTAATAATACCTAAATTCTTTT 4401
Query 71798 GATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCT 71857
|||| |||||| ||||| ||||| ||||| | ||||| ||||||||||||||| | |
Sbjct 4402 GATTGGTCTTTTCATTACAAGCATCTTTATATAACATAAATGGAGTACCAGTTTCAGTTT 4461
Query 71858 GAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAT-TCTTGTATCTCTTT 71916
| | ||||| ||| | | ||| | | | ||||| || | | ||| | | ||
Sbjct 4462 GGGCTTCTAAAATGGAATACCATAATTTTTGTGCCTTAATAGTTTGTCTACCACGACCTT 4521
Query 71917 TCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCA 71976
| | ||| |||| | ||||||| |||| || || || || || ||| |||||||
Sbjct 4522 -CACGTTCATATTTTTCATATAATTGTTCAAATTCTTCACCATAAACATCAGGTAATCCA 4580
Query 71977 GGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAG 72036
||| |||||| || | | |||| ||| || |||| | | || || ||||||||
Sbjct 4581 GGAGCTTCATTAGGGGAAAATAATGTCCAATCACCATTTTGTTCCACACGCTTCATAAAT 4640
Query 72037 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTA 72096
| |||||||||||| | ||| |||| |||||||| |||| || || || ||| |
Sbjct 4641 AAATCAGGAATCCATAATGCTGGGAATAAATCTCTGGCTCTAATTTCTTCTTTACCTTGA 4700
Query 72097 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 72156
|| ||| ||| ||| | || | | |||||| |||||||| ||||| || || | |||
Sbjct 4701 TTTTTTCTAATATCAATAAAATCAAAAATATCTGAATGCCATGGTTCTAAATAGAGGGCA 4760
Query 72157 ATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 72216
| | | || || | || || || || ||||| | || | |||||||| || ||||
Sbjct 4761 AAAGCACCTGGTCTCTTATTACCACCTTGATCGACATAACGTGCGGTGTTGTTGAAAACA 4820
Query 72217 CTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTG 72276
| | ||| || |||||||| ||||| | |||||| || || | ||||| ||| |
Sbjct 4821 CGTACCATGGGGATAATACCGTTGGAAGTACCATTAGTACCAGCAATATAAGCCCCAGTA 4880
Query 72277 GCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCAT 72336
| ||||||||| ||| || ||| || || || || | || || || ||||| |||
Sbjct 4881 GAACGAATATTATGAATATGTAAACCAATACCACCAGCACTCTTTGAAATCAATGCACAT 4940
Query 72337 CGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAG 72396
||| || |||||||| || || || || |||||| ||||| || || |||||
Sbjct 4941 GTTTTCAAAGTATCATAAATCCCATCAATTGAATCATCTTTCATGGCAACTAAGAAACAT 5000
Query 72397 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 72456
|||||||| ||| || || ||||||||||| || || ||| | || || ||
Sbjct 5001 GACGACATTTGTGGACTTGGGGTACCGGCATTAAATAAAGTTGGTGAACCATGAGTGAAA 5060
Query 72457 CATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATT 72516
| |||| |||| | ||| || | |||||| || ||||||| ||| ||
Sbjct 5061 AACTTTTGTGACATCATATTATAAGATTCAATAACTCGAGGGATATCCCTACCATGAATA 5120
Query 72517 CCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTC 72576
|| | || || | ||| | | ||| || ||||||||| | | || ||| | | |
Sbjct 5121 CCAATTGCCACTCTCATGATTAAATGTTGTGGTCTTTCAGCAACTTTACCATTAACTCTT 5180
Query 72577 AACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTT 72634
|| || || ||| |||| ||||||||||| |||||||| || || ||||| || || |
Sbjct 5181 AATAAATAAGATCTTTCTAAAGTTTTAAATCCAAAATAATTATAATTGAAA--TCACGAT 5238
Query 72635 CGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATAC 72694
|||||| |||| | ||||| | || ||| || || || |||| ||| | |
Sbjct 5239 CGTAAACAATAGCTGAATTTAATTCATCGGCATGTTCACAAATAATAT-CATAAGTCTCC 5297
Query 72695 TT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCC 72753
|| ||||| || ||||||||||| | | || || |||||||| | |||| || |
Sbjct 5298 TTGGAAATCATAGGAGAATGTTTATCGGTCTTGGGGTTAACATAATCATATAATTCTTTA 5357
Query 72754 ATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCG 72813
| |||| | | || |||| | |||| || |||| ||| ||||| || ||||| ||
Sbjct 5358 CTAACTTGAGAATATTGTTTGGTAGTTTGTTTATGTAAATTAGATACAGCAATTCTAGCA 5417
Query 72814 GCTAGAATGGCATAATCTGGATG--TTGT-GTAGTACAAGTGGCTGCTATTTCTGCTGCC 72870
|||| |||||||||||| ||||| | || || || || || || |||| || ||
Sbjct 5418 GCTAAAATGGCATAATCAGGATGAATAGTGGTCATATAA---GCAGCAGTTTCGGCAGCT 5474
Query 72871 AGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 72905
| | || ||||| ||||| ||||| |||| |||
Sbjct 5475 AAGTTATCTAATTCAACCGTGGTTACACCATGATA 5509
>seq1387
Length=15432
Score = 340 bits (376), Expect = 2e-88
Identities = 626/914 (68%), Gaps = 14/914 (2%)
Strand=Plus/Plus
Query 41755 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTT 41814
|| || |||||| || ||||| || ||| || | ||||| ||||| ||||| ||
Sbjct 2183 TTTAGCCATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTT 2242
Query 41815 TCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAttttttt 41874
|| | ||||| ||||||||||| || ||||| ||||| ||||||||||| || ||
Sbjct 2243 ACCAGCTAATGAAATATTTTCCATAAAGTCAAATGGATTTTGAACATTATAAACCTTCTT 2302
Query 41875 AAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTC 41934
| || ||| || | ||||| || || | ||||| | |||| ||||| ||
Sbjct 2303 ATTACCAAATGCAACTAATAATCTGTCGGCAACAAATTCAACATATTGACACATCAATTT 2362
Query 41935 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGA 41994
||| ||||| |||| | ||||||| | || |||| | | |||||| |||||||
Sbjct 2363 ACAGTTCATACCTAATAAACTAACTGGTAATGCATCAGTGAAATATTCTTTTTCAATATC 2422
Query 41995 GACCGCGTCTGTTATAATAGATCTT----ACTGTTTCTTCACTCGGTGGATACAATAAAT 42050
|| || || | |||| ||||| || ||||| | ||| || ||||
Sbjct 2423 AACAGCTTCA---ACAATA-ATCTTTTCCACGATTTCTGGATCTGGTCTATTGTTCAAAT 2478
Query 42051 GTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGT 42110
| ||| | ||||| || ||||| || | || |||||||||| ||||||||| |
Sbjct 2479 GAGCAAATAATAAACAAGCAAAATCAGTATGTAACCCTTCATCTCTACAAATTAATTCAT 2538
Query 42111 TGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATG 42170
| || || || | || ||||||| || | || || | ||| || || || |||||||
Sbjct 2539 TTGAGAAAGTTAAACCTGGCATTAACCCTCTTTTCTTTAACCAGAAAATTGAGGCAAATG 2598
Query 42171 ATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG 42230
||||| |||||| || ||||| || || ||||| |||| | ||| || |||| |
Sbjct 2599 ATCCACTAAAGAAAATACCTTCAACAGCAGCAAATGCAACTAATCTTTCAGCATATAAGA 2658
Query 42231 C---ACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 42287
| | | ||| ||||| || |||||||| || || || | | |||||| ||
Sbjct 2659 CTTCAGTATCAGTGATCCATCTTAATGCCCAATCAGCTTTTCTTCTGATACAAGGAATAT 2718
Query 42288 TTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCA 42347
||| || |||||||| | || | ||| || |||||||| ||| ||||| || |
Sbjct 2719 GTTCAATAGCATTAAATAAGTAATCAGCTTCCTTTGGATCTTTAATATAAGTATCAATTA 2778
Query 42348 AAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATC 42407
|||| ||| |||| |||||||| |||||||| || ||||| || ||||| ||
Sbjct 2779 AAAGGGAATAAGTTTCAGAATGAATATTTTCAATCATAATTTGAAACCCATAGAATGATT 2838
Query 42408 TGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTC 42467
| || || | || || ||||||| |||| |||| ||||||||| || || || |
Sbjct 2839 TAGCTTCTGGAATTTGAACTTCTGCTGAAAAATTTTCAATTAAATTTTCATTAACAATAC 2898
Query 42468 CGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTA 42527
| ||| || ||||| || || || || | || |||||| |||| || | |
Sbjct 2899 CATCAGATGCAGCAAAGAATGCTAAGACTCTTGAAATGAAATATCTTTCATCATCATTCA 2958
Query 42528 ATTTAT---TCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATG 42584
|||||| ||||||||| | ||| ||| || ||| | |||||| | ||||||||||
Sbjct 2959 ATTTATCTCTCCAATCATGTAAATCCTTACTTAAATCAATTTCTTCAGCAGTCCAAAATG 3018
Query 42585 ATGCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAA 42644
|||||||||| || || || | | ||| || ||||||||| |||||| || |||||||
Sbjct 3019 ATGCTTCTGCTTTCTTGTAAAATTGCCAAATTTCATGATATCTAATTGGAAACATAACAA 3078
Query 42645 ATCTATTTGGATTT 42658
||||| |||||||
Sbjct 3079 ATCTACGTGGATTT 3092
>seq1180
Length=50914
Score = 107 bits (118), Expect = 3e-18
Identities = 324/492 (66%), Gaps = 10/492 (2%)
Strand=Plus/Minus
Query 71743 TATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 71802
|||| || |||||| || | ||| | |||| ||| || ||||| | ||||||
Sbjct 28158 TATTCCATGATTTCACAACATAAATTGGAAGACTTTATGACCCCCAAATTCTTTTGATTT 28099
Query 71803 CTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGAT 71862
|||| ||||| |||||||| ||||| ||| | || |||||| || | || |||
Sbjct 28098 GATTTTTCATTACAAGCATCCTTGTAAAGCATATATGGGCCACCAGTCTCGGTTTGGGAT 28039
Query 71863 TCTATAATCGCTTTCCAGACGACTCGAGCCTTTAT--TATATTCTTGTA-TCTCTTTTCT 71919
|||| || || |||| | | ||||| | || | | || || || ||
Sbjct 28038 TCTAATATAGCCATCCATAGTTTATGTGCCTTGACGGTAGACACAGCTAATCCCT---CT 27982
Query 71920 CTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCT-AATCCAGG 71978
||||||||| ||||||| | |||||||||| || || || | || ||||| ||
Sbjct 27981 CTTTCGTATCTCTCATATAATTGGACGAACTCGTCGCCATAA-CAATCACTCAATCCTGG 27923
Query 71979 ACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAG 72038
||| ||| | | || ||||| || | || || || ||||| |||| || |
Sbjct 27922 TGCAACATCTGGAGAAAATAACGACCAGTCCGCGTCTTCTTTCACTCGCCTCATGAATAA 27863
Query 72039 ATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTAT 72097
|||||| | ||| | | | ||| |||| ||| || ||||| ||||| || || || ||
Sbjct 27862 ATCAGGCACCCATA-ATCCATAGAATAAATCCCTAGTTCTTTGCTCTTCATTACCATGAT 27804
Query 72098 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 72157
| ||| | | ||| | | | | ||||| |||||| || || | ||||| || |
Sbjct 27803 TTTTTCTCATATCTAAAATATCAAAGATATCGCCATGCCAAGGCTCTATATATATAGCGA 27744
Query 72158 TAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 72217
| ||||||||||| || || ||||||| ||||| || ||||| ||| | || |
Sbjct 27743 ATGCCCCCGGCCGTTTACCACCACCTTGATCTACATATCTTGCAGTGTTGTTAAACACGC 27684
Query 72218 TCAACATTGGAA 72229
| ||||||||
Sbjct 27683 GGAGCATTGGAA 27672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671123486953480
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