Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq1163 203 4e-47
seq731 87.8 2e-12
>seq1163
Length=41016
Score = 203 bits (224), Expect = 4e-47
Identities = 197/251 (78%), Gaps = 2/251 (1%)
Strand=Plus/Plus
Query 7004 TAGCATAAAATTGACACAATACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATG 7063
|| |||| |||||||| || ||||||||||| || | | | || | | ||||| |
Sbjct 7834 TAACATAGAATTGACAGAAGACATGACATGGTGGAAGAGCCATCTTTGCAAAATCAGGCG 7893
Query 7064 GATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAA 7123
|||||||||||| ||| | ||| | |||||||| ||||||||| ||||||||| |||| |
Sbjct 7894 GATTCCAAGCAGACATAATAATTCTTCTATCATATGGATTTGTCTTTAATTTTTTTATCA 7953
Query 7124 TTATTTGTAATTGATC-TATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTA 7182
|||||||| || ||| || ||||| ||||| ||||| ||||| | |||| | |
Sbjct 7954 CGTCGTGTAATTGGTCATAT-CCTTGACCAGTATAATCAGTATCACAATCTTTATACTCA 8012
Query 7183 GCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTCACGATGA 7242
|||||||||||||||||||| |||||||||| |||||||||||||||||| ||||| |
Sbjct 8013 GCTCCAAAATGTCTCCATTGGAACCCATAAACCGGACCTAAATCACCTTCTCGACGATCA 8072
Query 7243 TTAAATCCTAA 7253
| ||||| ||
Sbjct 8073 GTTAATCCCAA 8083
Score = 116 bits (128), Expect = 4e-21
Identities = 138/187 (74%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 6805 GTTAATTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTA 6864
|| ||||| ||||| | || | |||||||||||||||| ||||||||| |||| |||
Sbjct 7578 GTAAATTGCTCTTTCAATGCATCAATATGATCTAAATAAACATGAGCATCACCTAAAGTA 7637
Query 6865 TGAATAAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCA 6924
||||| ||||| || | ||| || || | || ||||| | | || || ||||||
Sbjct 7638 TGAATGAATTCTCCACAGTCCATGTCGACGACGTGGGCAATCATCTTGGTCAACAATGCA 7697
Query 6925 TAAGAAGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGA 6984
|||||||| | ||| || || ||||| || ||||| || ||||||||||| || |
Sbjct 7698 TAAGAAGCAATATTGAATGGAACACCCAAGCCCATGTCACAAGATCTTTGATACAATAAA 7757
Query 6985 CAAGATA 6991
|| ||||
Sbjct 7758 CAGGATA 7764
>seq731
Length=35651
Score = 87.8 bits (96), Expect = 2e-12
Identities = 108/148 (73%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 19356 TACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATGA 19415
|||| |||| |||||||||||||| ||| || ||||| || || ||| | |
Sbjct 17769 TACCACAAATTGGTGATAAGTTTGCATCTAGACATGGGCAAAAGGGTACTATTGGGGTCA 17828
Query 19416 TTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTA 19475
||| | || |||||||||||||| || | | ||||| ||||| ||| | ||||| |
Sbjct 17829 CGTATAGACATGAAGATATGCCTTTCACAGCACAAGGTATTGTGCCAGATTTAATTATCA 17888
Query 19476 ACCCACATGCTTTTCCAAGTCGAATGAC 19503
|||| |||||| ||||| ||| |||||
Sbjct 17889 ACCCCCATGCTATTCCATCTCGTATGAC 17916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595858049146800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |