Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06- 03] 1,873 sequences; 16,614,112 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1702 93.3 7e-15 seq1762 87.8 3e-13 >seq1702 Length=18582 Score = 93.3 bits (102), Expect = 7e-15 Identities = 175/256 (68%), Gaps = 1/256 (0%) Strand=Plus/Minus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||||| | |||||||||| ||||| ||||| ||||||||||| | | | || | Sbjct 15652 AGATCT-TGAGAGATAACATTCAAGGTATCACTAAGCCAGCTATTAGAAGATTAGCCAGA 15594 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| || |||||| | |||| || | |||||||| || | | ||| ||||| Sbjct 15593 AGAGGTGGTGTTAAGCGTATTTCTGCTTTAATTTATGAAGAAGTTAGAGTTGTCTTGAAA 15534 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 || | | | ||||| |||||| || ||||| || ||||| || | ||| Sbjct 15533 CAATTTTTAGAAAATGTTATTAGAGATGCTGTCACTTATACTGAACACGCCAAGAGAAAG 15474 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 ||||| || ||| ||||| | || || || || || | ||||| | | | |||||| Sbjct 15473 ACTGTTACTTCCTTGGATGTTGTTTACGCCTTAAAGAGACAAGGTAGAACCTTATATGGT 15414 Query 16688 TTTGGAAGTTAATCTT 16703 || || |||||| || Sbjct 15413 TTCGGTGGTTAATTTT 15398 >seq1762 Length=80798 Score = 87.8 bits (96), Expect = 3e-13 Identities = 175/258 (68%), Gaps = 1/258 (0%) Strand=Plus/Minus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||||| | |||||||||| ||||| || |||||||||||||| | | | || | Sbjct 49639 AGATCT-TGAGAGATAACATTCAAGGTATTACCAAGCCAGCTATTAGAAGATTAGCAAGA 49581 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| || |||||| | || | || | |||||||| || | | ||| ||||| Sbjct 49580 AGAGGTGGTGTTAAGCGTATTTCCGCTTTAATTTATGAAGAAGTTAGAGTTGTCTTGAAA 49521 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 ||| | | | ||| ||| |||||| | ||||| || ||||| || | ||| Sbjct 49520 CAATTCTTAGAAAACGTCATCAGAGATGCTGTTACTTATACTGAACACGCCAAGAGAAAG 49461 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 ||||| || ||| | ||| | || || || || || | ||||| | | | |||||| Sbjct 49460 ACTGTTACTTCCTTAGATGTTGTTTACGCCTTAAAGAGACAAGGTAGAACCTTGTATGGT 49401 Query 16688 TTTGGAAGTTAATCTTCT 16705 || || ||||| || || Sbjct 49400 TTCGGTGGTTAAACTGCT 49383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073487502989