Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq1387 208 2e-48
seq1308 145 2e-29
seq1498 102 2e-16
>seq1387
Length=15432
Score = 208 bits (230), Expect = 2e-48
Identities = 538/807 (67%), Gaps = 32/807 (4%)
Strand=Plus/Minus
Query 22217 TAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTGCAT 22276
|||||||||||||| | | || ||||| ||| ||| ||| || | |||||| ||
Sbjct 2922 TAGCATTCTTTGCTGCATCTGATGGTATTGTTAATGAAAATTTAATTGAAAATTTTTCAG 2863
Query 22277 CTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATG 22336
| ||| ||||| ||||| || | || |||||||| | ||||| ||||||||||||
Sbjct 2862 CAGAAGTTCAAATTCCAGAAGCTAAATCATTCTATGGGTTTCAAATTATGATTGAAAATA 2803
Query 22337 TTCACGCGGAAACATATTC---TATGAT-GCTACAGTCACTCGTAGAAGATAAAGACGAA 22392
|||| | ||||| ||||| | | || | ||| | | | || ||||| | | |||
Sbjct 2802 TTCATTCTGAAACTTATTCCCTTTTAATTGATAC--TTA-TATTA-AAGATCCAAAGGAA 2747
Query 22393 CAACGAAACTTATTCCGCGCGATTCGCACC-ATTCAATCAATTAAGAATAAGGCAGATTG 22451
||||||| || ||| | || |||| | || | | || || |||||
Sbjct 2746 GCTGATTACTTATTTAATGCTATT-GAACATATTCCTTGTATCAGAAGAAAAGCTGATTG 2688
Query 22452 GGCGCTGAAATGGATGA---ACAATGAACGTTCATTCGCGGAACGTCTTATTGCATTTGC 22508
||| | | |||||| | | | |||| | || || ||| | | ||||||||||
Sbjct 2687 GGCATTAAGATGGATCACTGATACTGAAGTCTTATATGCTGAAAGATTAGTTGCATTTGC 2628
Query 22509 TGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCG 22568
|| |||||||| ||||||||| |||| ||||| |||| || ||| |||| ||| |
Sbjct 2627 TGCTGTTGAAGGTATTTTCTTTAGTGGATCATTTGCCTCAATTTTCTGGTTAAAGAAAAG 2568
Query 22569 TGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCA 22628
| | ||||| ||| |||| || |||||||| |||||| | ||||||| || | ||
Sbjct 2567 AGGGTTAATGCCAGGTTTAACTTTCTCAAATGAATTAATTTGTAGAGATGAAGGGTTACA 2508
Query 22629 TACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAAC---TTCCATATGA 22685
||| |||||||| ||| | ||| | |||| | | ||| || |||| ||
Sbjct 2507 TACTGATTTTGCTTGTTTATTATTT---GCTCATTTGAACAATAGACCAGATCCA---GA 2454
Query 22686 AACTGTACTTGATATTATTACAAATGCAGTTGAACTTG--AACGTCTATTTATTTGCGAG 22743
|| || | |||||| | || ||||| ||| || | ||||| | ||
Sbjct 2453 AATCGTGGAAAAGATTATTGTTGAAGCTGTTGATATTGAAAAAGAATATTTCACT--GAT 2396
Query 22744 GCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATTT 22803
|| |||||||| ||| | | ||||| || ||| ||| || |||| || |||||
Sbjct 2395 GCATTACCAGTTAGTTTATTAGGTATGAACTGTAAATTGATGTGTCAATATGTTGAATTT 2336
Query 22804 GTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATCCA 22863
||||| || | ||||| || || | ||| || ||| |||||| || ||||||
Sbjct 2335 GTTGCCGACAGATTATTAGTTGCATTTGGTAATAAGAAGGTTTATAATGTTCAAAATCCA 2276
Query 22864 TTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTT 22923
||||| | |||||| ||||||| | | || || || || || || ||||| ||||||
Sbjct 2275 TTTGACTTTATGGAAAATATTTCATTAGCTGGTAAAACTAACTTTTTTGAAAAGAGAGTT 2216
Query 22924 GGTGAATACCAAAAAGCAGGTGTTATGGATGCATTGAATGA------TAGTTCAAAACAC 22977
||| || ||||| || |||||||||| | | ||||| |||||| || ||
Sbjct 2215 TCTGATTATCAAAAGGCTGGTGTTATGGCTAAACACAATGAACCAACTAGTTCTAACCAT 2156
Query 22978 GGATTTACATTAGATGAAGAATTTTAA 23004
| ||| | || |||||||| || |||
Sbjct 2155 GACTTTTCCTTTGATGAAGATTTCTAA 2129
>seq1308
Length=6085
Score = 145 bits (160), Expect = 2e-29
Identities = 946/1504 (63%), Gaps = 58/1504 (4%)
Strand=Plus/Minus
Query 363091 GGTCTATATGATGGTGTTACAACTGTTCAGCTAGACAATCTTGCCGTAGAAACTGCAACT 363150
||| | ||| ||||||| || || ||| | |||| || | || | |||||||| ||
Sbjct 5515 GGTGTTTATCATGGTGTAACCACGGTTGAATTAGATAACTTAGCTGCCGAAACTGCTGCT 5456
Query 363151 TATCTGACCATGACGCATCCTGATTACTCCAAACTGGCTGCTCGCATTGCAGTTTCGTCT 363210
||| |||||| | ||||||||||| ||| | |||||| | ||||| || || |
Sbjct 5455 TATATGACCACTATTCATCCTGATTATGCCATTTTAGCTGCTAGAATTGCTGTATCTAAT 5396
Query 363211 CTTCATAAAATGAC-ATCAAATAAGTTT-TCCAGT--GTCATGGATAGTCTGTATAACTA 363266
| |||||| || | |||| || || || ||| || | | || | ||| | ||
Sbjct 5395 TTACATAAACAAACTACCAAACAATATTCTCAAGTTAGTAAAGAAT----TATATGATTA 5340
Query 363267 TGTCAATACAAAGACCGGTAAGTGGTCACCACTCATTGCCGATGACATTATTGAATGTAT 363326
||| || | ||||||| ||| || || | ||| || | || | | ||| |||
Sbjct 5339 TGTTAACCCCAAGACCGATAAACATTCTCCTATGATTTCCAAGGAGACTTATGATATTAT 5280
Query 363327 CCGTTCTAATGCGGAAGTTTTCGATGACGTTATCAATTATGAGAAGGATCTCGAGTATGA 363386
|| |||| || | || || | ||| ||| || ||| || | ||| |
Sbjct 5279 TTGTGAACATGCCGATGAATTAAATTCAGCTATTGTTTACGATCGTGATTTCAATTATAA 5220
Query 363387 TATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGT 363446
| ||| |||| ||| || | || | ||| || ||| | | |||||| | |||
Sbjct 5219 TTATTTTGGATTTAAAACTTTAGAAAGATCTTATTTATTAAGAGTTAATGGTAAAGTTGC 5160
Query 363447 TGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGA 363506
|||| | || || ||| | | ||| | || || |||||||| ||| | |||| |
Sbjct 5159 TGAAAGACCACAACATTTAATCATGAGAGTGGCAATTGGTATTCATGGTAGGGAT----A 5104
Query 363507 TGCCGCGA----TTGAAACATATAAGCTTCTAAGTGCTC----GTGTATTCACGCACGCC 363558
| || ||| ||||| | ||||| | | || | | || | ||||| || |
Sbjct 5103 TCCCTCGAGTTATTGAATCTTATAATATGAT--GT-CACAAAAGTTT-TTCACTCATGGT 5048
Query 363559 ACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTC-T 363617
| ||||| | | ||||| || || | | |||||| ||||| || || |||||| |
Sbjct 5047 TCACCAACTTTATTTAATGCCGGTACCCCAAGTCCACAAATGTCGTCATG-TTTCTTAGT 4989
Query 363618 AAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTAT 363677
||||| || ||||| || || || || | ||| || | || | ||||| | ||
Sbjct 4988 TGCCATGAAAGATGATTCAATTGATGGGATTTATGATACTTTGAAAACATGTGCATTGAT 4929
Query 363678 TTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTT 363736
||| |||| ||| || || |||||| || || || ||| ||||| | || | ||
Sbjct 4928 TTCAAAGAGTGCTGGTGGTATTGGTTTACATATTCATAATATTCGTTCTACTGGGGC-TT 4870
Query 363737 ACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGAC 363795
| ||| || || || |||| | || || | | |||||| | ||||| || ||
Sbjct 4869 ATATTGCTGGTACTAATGG-TACTTCCAACGGTATTATCCCCATGGTACGTGTTTTCAAC 4811
Query 363796 AATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTAT 363855
|| || || | || ||||| || ||||| ||| | ||| || ||||| | |||
Sbjct 4810 AACACCGCACGTTATGTCGATCAAGGTGGTAATAAGAGACCAGGTGCTTTTGCCCTCTAT 4751
Query 363856 CTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAA 363915
| || || ||| | ||||||||||| ||| |||| | | ||||| || |||
Sbjct 4750 TTAGAACCATGGCATTCAGATATTTTTGATTTTATTGATATTAGAAAAAATCAAGGTAAA 4691
Query 363916 GAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAG 363975
|| ||| | | || | ||| | ||| ||| | ||| || |||| |||||||||
Sbjct 4690 GAAGAAATTAGAGCCAGAGATTTATTCCCAGCATTATGGATTCCTGATTTATTTATGAAG 4631
Query 363976 CGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCC 364035
|| ||||| | | ||||| || | |||| ||| | ||| ||| || | |
Sbjct 4630 CGTGTGGAACAAAATGGTGATTGGACATTATTTTCCCCTAATGAAGCTCCTGGATTACCT 4571
Query 364036 GATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCT 364095
||||| | ||||| || | || |||| ||||| |||||| || || | |
Sbjct 4570 GATGTTTATGGTGAAGAATTTGAACAATTATATGAAAAATATGAACGTGAAGGTCGTGGT 4511
Query 364096 CGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACA 364155
| | || ||| ||||| || |||||| | |||| | || | || | ||| ||
Sbjct 4510 AGACAAACTATTAAGGCACAAAAATTATGGTATTCCATTTTAGAAGCCCAAACTGAAACT 4451
Query 364156 GGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTT 364215
|| || || | |||||| || |||||| | || || ||| |||| || || | |
Sbjct 4450 GGTACTCCATTTATGTTATATAAAGATGCTTGTAATGAAAAGACCAATCAAAAGAATTTA 4391
Query 364216 GGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAG 364275
|||| ||| | ||| ||||| || ||| ||||||| | | || || ||
Sbjct 4390 GGTATTATTAAATCATCTAACTTATGTTGTGAAATTGTTGAATATTCATCACCTGAAGAA 4331
Query 364276 ACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT---AAAAGATG----- 364327
||| || ||||| | || || ||||| | || |||||||| ||||||||
Sbjct 4330 GTTGCTGTCTGTAATTTAGCTTCAATCGCCTTACCAGCGTTTGTTGAAAAAGATGATGAT 4271
Query 364328 ----------GTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGC 364377
|| |||||| | || | |||| | ||| | || |||| |
Sbjct 4270 CATTCATGGTATAATTTTGATAA-----AT-TACATGAAATTACCAAGATTGTTACTCGT 4217
Query 364378 AATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAAT 364437
||| | | || ||||| || ||||||||||| |||| |||||| | ||| |||
Sbjct 4216 AATTTAAATAAAGTTATTGATCGTAATTATTATCCTGTTCCAGAAGCCAAAAATTCAAAT 4157
Query 364438 ATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGC-T 364496
||| || | || |||| | | || || || || | ||||| | ||| ||| || |
Sbjct 4156 ATGAAAAATAGACCAATTGCTTTGGGGGTCCAAGGTTTGGCTGATGCTTTCATG--GCTT 4099
Query 364497 CAAGA-TGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAA 364555
|||| | |||||||||| | || || | | |||||| | || |||||||| |
Sbjct 4098 TAAGATTACCATTTGATTCTCAAGAAGCCAGAGAATTAAATATTCAAATTTTTGAAACCA 4039
Query 364556 TGTA 364559
| ||
Sbjct 4038 TTTA 4035
>seq1498
Length=40732
Score = 102 bits (112), Expect = 2e-16
Identities = 160/228 (70%), Gaps = 1/228 (0%)
Strand=Plus/Plus
Query 145524 AATTGAATTAAATCTTCATCTGAAAATCCAGTTCCGATCTTGCATACACTTTGGAACACT 145583
|||||| | |||||||| || |||||||||||| ||||| ||| ||| ||| ||
Sbjct 28393 AATTGAGT-AAATCTTCGTCGCTAAATCCAGTTCCAATCTTACATGTCGTTTCAAACTCT 28451
Query 145584 TCTTCGTCTGGATCATACACCGCAAGAAGGTATGCACCATATACACCAGTACGTTTTCCG 145643
|| ||| ||| |||| || | |||| || |||||||| ||| || | ||| ||
Sbjct 28452 CCTGTATCTTGATTATACGATGCTAAAAGGAATCCACCATATGTACCTGTCCTTTTCCCC 28511
Query 145644 CGACCGGTATACCCCGCAATTGGTACAAGATCACAACTATCACCCATTCCGGCAAGATAA 145703
||| |||| || | || || | ||| | |||||| | ||| || | ||||
Sbjct 28512 TTACCATTATATGCCCCTATAACAACCAAGTCAAGAGAATCACCTACTCCTGCCAAATAA 28571
Query 145704 TCCTTTTTAAGTTTTAGCCAATTGAGAGAACGTTTCGATGGTTCATAG 145751
|||||||| | ||| |||||||| | || | ||| ||||||||||||
Sbjct 28572 TCCTTTTTCAATTTAAGCCAATTACGTGACCTTTTAGATGGTTCATAG 28619
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303322322364686
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