Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06- 03] 1,873 sequences; 16,614,112 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1530 105 6e-18 >seq1530 Length=119309 Score = 105 bits (116), Expect = 6e-18 Identities = 179/259 (69%), Gaps = 9/259 (3%) Strand=Plus/Minus Query 23959 CAAATTATATAAGTACTTTTTAGCCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTG 24018 |||||||||||| ||| || ||||| ||||| | || || || || ||||| | Sbjct 25611 CAAATTATATAACTACATT-------AACAA--TGCAAATTTTCGTCAAGACTTTAACCG 25561 Query 24019 GAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGA 24078 | || | |||||| | ||||| || | |||||| ||||| | || || || | Sbjct 25560 GTAAGACTATTACCTTAGAAGTAGAATCTTCCGACACTATCGATAACGTTAAGTCTAAAA 25501 Query 24079 TTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAAC 24138 | || || ||||| || || || |||||||| | |||||| | || || ||| Sbjct 25500 TCCAAGATAAGGAAGGTATTCCACCAGATCAACAACGTTTGATTTTTGCTGGTAAACAAT 25441 Query 24139 TCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAG 24198 | ||||| | |||| | ||| || ||||| ||||| |||||||| | ||||||| Sbjct 25440 TAGAAGACGGTAGAACTTTATCCGACTACAACATCCAAAAGGAATCTACTTTACATTTAG 25381 Query 24199 TGTTAAGATTGAGAGGAGG 24217 |||||||||| ||||| || Sbjct 25380 TGTTAAGATTAAGAGGTGG 25362 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || |||||||| || | |||||| | ||||| || | Sbjct 25132 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTTGAATCTTCT 25073 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | ||||| || || || || ||||| || || || |||||| Sbjct 25072 GACACTATTGACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCACCAGATCAA 25013 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | |||||| | || || ||| | ||||| | |||| | ||| || ||| Sbjct 25012 CAACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACATTATCCGACTACAAC 24953 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| |||||||| | |||||||| |||||||||||||| || Sbjct 24952 ATCCAAAAGGAATCTACTTTACATTTAGTTTTAAGATTGAGAGGTGG 24906 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || ||||| || || | || ||| | ||||| || | Sbjct 25360 ATGCAAATTTTCGTTAAGACCTTAACCGGTAAGACCATCACCTTGGAAGTTGAATCTTCT 25301 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | ||||| || || || || ||||| || ||||| |||||| Sbjct 25300 GACACTATTGACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCTCCAGATCAA 25241 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 || | |||||| | || || ||| | ||||||| |||| | | | | || || || Sbjct 25240 CAACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAA-CATTATCTGACTACAA 25182 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||| ||||| |||||||| | |||||||| || ||||||||||| || Sbjct 25181 CATCCAAAAGGAATCTACTTTACATTTAGTTTTGAGATTGAGAGGTGG 25134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429926185770315