Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq1530 105 6e-18
>seq1530
Length=119309
Score = 105 bits (116), Expect = 6e-18
Identities = 179/259 (69%), Gaps = 9/259 (3%)
Strand=Plus/Minus
Query 23959 CAAATTATATAAGTACTTTTTAGCCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTG 24018
|||||||||||| ||| || ||||| ||||| | || || || || ||||| |
Sbjct 25611 CAAATTATATAACTACATT-------AACAA--TGCAAATTTTCGTCAAGACTTTAACCG 25561
Query 24019 GAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGA 24078
| || | |||||| | ||||| || | |||||| ||||| | || || || |
Sbjct 25560 GTAAGACTATTACCTTAGAAGTAGAATCTTCCGACACTATCGATAACGTTAAGTCTAAAA 25501
Query 24079 TTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAAC 24138
| || || ||||| || || || |||||||| | |||||| | || || |||
Sbjct 25500 TCCAAGATAAGGAAGGTATTCCACCAGATCAACAACGTTTGATTTTTGCTGGTAAACAAT 25441
Query 24139 TCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAG 24198
| ||||| | |||| | ||| || ||||| ||||| |||||||| | |||||||
Sbjct 25440 TAGAAGACGGTAGAACTTTATCCGACTACAACATCCAAAAGGAATCTACTTTACATTTAG 25381
Query 24199 TGTTAAGATTGAGAGGAGG 24217
|||||||||| ||||| ||
Sbjct 25380 TGTTAAGATTAAGAGGTGG 25362
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || |||||||| || | |||||| | ||||| || |
Sbjct 25132 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTTGAATCTTCT 25073
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| || || | ||||| || || || || ||||| || || || ||||||
Sbjct 25072 GACACTATTGACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCACCAGATCAA 25013
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| | |||||| | || || ||| | ||||| | |||| | ||| || |||
Sbjct 25012 CAACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACATTATCCGACTACAAC 24953
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| ||||| |||||||| | |||||||| |||||||||||||| ||
Sbjct 24952 ATCCAAAAGGAATCTACTTTACATTTAGTTTTAAGATTGAGAGGTGG 24906
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || ||||| || || | || ||| | ||||| || |
Sbjct 25360 ATGCAAATTTTCGTTAAGACCTTAACCGGTAAGACCATCACCTTGGAAGTTGAATCTTCT 25301
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| || || | ||||| || || || || ||||| || ||||| ||||||
Sbjct 25300 GACACTATTGACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCTCCAGATCAA 25241
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169
|| | |||||| | || || ||| | ||||||| |||| | | | | || || ||
Sbjct 25240 CAACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAA-CATTATCTGACTACAA 25182
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||| ||||| |||||||| | |||||||| || ||||||||||| ||
Sbjct 25181 CATCCAAAAGGAATCTACTTTACATTTAGTTTTGAGATTGAGAGGTGG 25134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429926185770315
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |