Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06- 03] 1,873 sequences; 16,614,112 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq1530 107 2e-18 seq1705 82.4 6e-11 >seq1530 Length=119309 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| ||||| || | || || || ||||||||| | ||| || || Sbjct 25132 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTTGAATCTTCT 25073 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| ||| |||| || || ||||| ||||| ||||| | || ||||| Sbjct 25072 GACACTATTG-ACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCACCAGATCA 25014 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | | |||| ||| || |||||||||||||| | | ||| | |||| || || Sbjct 25013 ACAACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACATTATCCGACTACAA 24954 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| ||||| || |||||| ||||| | || || |||||| |||| || Sbjct 24953 CATCCAAAAGGAATCTACTTTACATTTAGTTTTAAGATTGAGAGGTGG 24906 Score = 107 bits (118), Expect = 2e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 115279 ATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA 115338 ||||| |||||||||||| ||||| || | || || || || |||||| | ||| || Sbjct 25595 ATTAACAATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCTTAGAAGTAGA 25536 Query 115339 GTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGT 115398 || ||||||| | | | || || ||||| ||||| ||||| | || Sbjct 25535 ATCTTCCGACACTATCGATAACGTTAAGTCTAAAATCCAAGATAAGGAAGGTATTCCACC 25476 Query 115399 TGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGA 115458 ||||| ||| | | |||| ||| || |||||||||||||| | | ||| | |||| Sbjct 25475 AGATCAACAACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTTTATCCGA 25416 Query 115459 TTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || ||||| ||||| || |||||| ||||| | ||||| ||||| |||| || Sbjct 25415 CTACAACATCCAAAAGGAATCTACTTTACATTTAGTGTTAAGATTAAGAGGTGG 25362 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| ||||| || | || || || ||||| ||| | ||| || || Sbjct 24904 ATGCAAATTTTCGTCAAGACCTTAACCGGTAAGACCATCACCTTGGAAGTTGAATCTTCT 24845 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| ||| |||| || || ||||| ||||| ||||| |||| ||||| Sbjct 24844 GACACTATTG-ACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATCCCACCAGATCA 24786 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | | |||| || || |||||||||||||||| | ||| | | || || || Sbjct 24785 ACAACGTTTGATTTTCGCTGGTAAACAATTAGAAGATGGTAGAACATTATCTGACTACAA 24726 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| ||||| || |||||| ||||| | || |||||||| |||| || Sbjct 24725 CATCCAAAAGGAATCTACTTTACATTTAGTCTTGAGATTAAGAGGTGG 24678 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| || || || | || || || ||||| ||| | ||| || || Sbjct 25360 ATGCAAATTTTCGTTAAGACCTTAACCGGTAAGACCATCACCTTGGAAGTTGAATCTTCT 25301 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| ||| |||| || || ||||| ||||| ||||| | || ||||| Sbjct 25300 GACACTATTG-ACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCTCCAGATCA 25242 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | | |||| ||| || |||||||||||||||| | ||| | | || || || Sbjct 25241 ACAACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACATTATCTGACTACAA 25182 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| ||||| || |||||| ||||| | || ||||||||| |||| || Sbjct 25181 CATCCAAAAGGAATCTACTTTACATTTAGTTTTGAGATTGAGAGGTGG 25134 >seq1705 Length=31738 Score = 82.4 bits (90), Expect = 6e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 115282 AAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTC 115341 ||||||||||||||| ||||| || | || || || || |||||| | ||| || || Sbjct 13493 AAAAATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACTATTACCTTAGAAGTTGAATC 13552 Query 115342 CAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTG 115400 ||||| ||| |||| || ||| || || || || ||||| | || || Sbjct 13553 TTCTGACACCATTG-ACAATGTCAAATCCAAGATCCAAGACAAGGAAGGTATTCCACCTG 13611 Query 115401 ATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATT 115460 | || |||||| | || | || || || ||||||||||||| | ||| | | || | Sbjct 13612 ACCAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACT 13671 Query 115461 ATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 | ||||| ||||| || ||||| |||| | || || ||||| |||| || Sbjct 13672 ACAACATCCAAAAGGAATCTACCTTACACTTAGTCTTAAGATTAAGAGGTGG 13723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425334290592760