Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq1530 163 2e-35
seq1705 122 8e-23
>seq1530
Length=119309
Score = 163 bits (180), Expect = 2e-35
Identities = 177/232 (76%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054
|||||||||||| || || |||||||| |||||||| | || || | ||||| || ||
Sbjct 25592 AACAATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCTTAGAAGTAGAATC 25533
Query 25055 GTCTGACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113
|| ||||||||||| | || | ||| |||||| || || ||||| |||||||| |
Sbjct 25532 TTCCGACACTATCGA-TAACGTTAAGTCTAAAATCCAAGATAAGGAAGGTATTCCACCAG 25474
Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173
| ||||| || | |||||||| || |||||||||||||| | | | ||| | ||| |
Sbjct 25473 ATCAACAACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTTTATCCGACT 25414
Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||| || ||||| ||||| || ||||||||||| |||| ||||||| ||
Sbjct 25413 ACAACATCCAAAAGGAATCTACTTTACATTTAGTGTTAAGATTAAGAGGTGG 25362
Score = 138 bits (152), Expect = 1e-27
Identities = 169/229 (74%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| || |||||||| ||||||| | ||||| || || |||
Sbjct 24904 ATGCAAATTTTCGTCAAGACCTTAACCGGTAAGACCATCACCTTGGAAGTTGAATCTTCT 24845
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||||| || || || ||| |||||| || || ||||| || ||||| || |
Sbjct 24844 GACACTATTGA--CAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATCCCACCAGATC 24787
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| || | ||||| || || |||||||||||||||| | | || | || ||||
Sbjct 24786 AACAACGTTTGATTTTCGCTGGTAAACAATTAGAAGATGGTAGAACATTATCTGACTACA 24727
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| || ||||| ||||| || |||||||||| | || ||||||| ||
Sbjct 24726 ACATCCAAAAGGAATCTACTTTACATTTAGTCTTGAGATTAAGAGGTGG 24678
Score = 138 bits (152), Expect = 1e-27
Identities = 169/229 (74%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| || || ||||| |||| || | ||||| || || |||
Sbjct 25132 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTTGAATCTTCT 25073
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||||| || || || ||| |||||| || || ||||| |||||||| || |
Sbjct 25072 GACACTATTGA--CAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCACCAGATC 25015
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| || | |||||||| || |||||||||||||| | | | || | ||| ||||
Sbjct 25014 AACAACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACATTATCCGACTACA 24955
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| || ||||| ||||| || |||||||||| |||| | ||||| ||
Sbjct 24954 ACATCCAAAAGGAATCTACTTTACATTTAGTTTTAAGATTGAGAGGTGG 24906
Score = 138 bits (152), Expect = 1e-27
Identities = 169/229 (74%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| || |||||||| ||||||| | ||||| || || |||
Sbjct 25360 ATGCAAATTTTCGTTAAGACCTTAACCGGTAAGACCATCACCTTGGAAGTTGAATCTTCT 25301
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||||| || || || ||| |||||| || || ||||| ||||| || || |
Sbjct 25300 GACACTATTGA--CAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCTCCAGATC 25243
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| || | |||||||| || |||||||||||||||| | | || | || ||||
Sbjct 25242 AACAACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACATTATCTGACTACA 25183
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| || ||||| ||||| || |||||||||| | || | ||||| ||
Sbjct 25182 ACATCCAAAAGGAATCTACTTTACATTTAGTTTTGAGATTGAGAGGTGG 25134
>seq1705
Length=31738
Score = 122 bits (134), Expect = 8e-23
Identities = 168/233 (72%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054
|| ||||||||| || || ||||| || || ||||| | || || | ||||| || ||
Sbjct 13493 AAAAATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACTATTACCTTAGAAGTTGAATC 13552
Query 25055 GTCTGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCT 25112
|||||||| || || || || || || ||| ||||| ||||| |||||||||
Sbjct 13553 TTCTGACACCATTGA--CAATGTCAAATCCAAGATCCAAGACAAGGAAGGTATTCCACCT 13610
Query 25113 GACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGAT 25172
|||||||| | | || || || || || ||||||||||||| | | ||| | ||
Sbjct 13611 GACCAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGAC 13670
Query 25173 TACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||| || ||||| ||||| || |||| ||||| |||| ||||||| ||
Sbjct 13671 TACAACATCCAAAAGGAATCTACCTTACACTTAGTCTTAAGATTAAGAGGTGG 13723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433318108340495
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |