Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_008520.2
Length=132239
Score E
Sequences producing significant alignments: (Bits) Value
seq1530 100 2e-16
>seq1530
Length=119309
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 111181 TTAAAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAA 111240
|||| |||||||||||| ||||| || | ||||| || || |||||| | ||| |||
Sbjct 25594 TTAACAATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCTTAGAAGTAGAA 25535
Query 111241 CCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTC 111300
| ||| || | | | || || ||||| || || ||||| ||||
Sbjct 25534 TCTTCCGACACTATCGATAACGTTAAGTCTAAAATCCAAGATAAGGAAGGTATTCCACCA 25475
Query 111301 GATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 111360
||||||||| | | |||| ||| || |||||||| ||||| || |||| | ||||
Sbjct 25474 GATCAACAACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTTTATCCGAC 25415
Query 111361 TATAATATACAAAAAGAATCTACACTACATTTAGTGTT 111398
|| || || ||||| |||||||| |||||||||||||
Sbjct 25414 TACAACATCCAAAAGGAATCTACTTTACATTTAGTGTT 25377
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
||||||||||| ||||| || | || || || ||||||||| ||||| ||| |
Sbjct 25132 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTTGAATCTTCT 25073
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
|| || ||| | | || || ||||| || || ||||| |||| ||||||
Sbjct 25072 GACACTATTGACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCACCAGATCAA 25013
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
||| | | |||| ||| || |||||||| ||||| || ||| | |||| || ||
Sbjct 25012 CAACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACATTATCCGACTACAAC 24953
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTT 111398
|| ||||| |||||||| |||||||||| ||
Sbjct 24952 ATCCAAAAGGAATCTACTTTACATTTAGTTTT 24921
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
||||||||||| || || || | ||||| || ||||| ||| ||||| ||| |
Sbjct 25360 ATGCAAATTTTCGTTAAGACCTTAACCGGTAAGACCATCACCTTGGAAGTTGAATCTTCT 25301
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
|| || ||| | | || || ||||| || || ||||| |||| ||||||
Sbjct 25300 GACACTATTGACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCTCCAGATCAA 25241
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
||| | | |||| ||| || |||||||| |||||| || ||| | | || || ||
Sbjct 25240 CAACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACATTATCTGACTACAAC 25181
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
|| ||||| |||||||| |||||||||| ||| | || | |||||
Sbjct 25180 ATCCAAAAGGAATCTACTTTACATTTAGTTTTGAGATTGAGAGGTGG 25134
Score = 89.7 bits (98), Expect = 4e-13
Identities = 161/234 (69%), Gaps = 1/234 (0%)
Strand=Plus/Minus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
||||||||||| ||||| || | ||||| || ||||| ||| ||||| ||| |
Sbjct 24904 ATGCAAATTTTCGTCAAGACCTTAACCGGTAAGACCATCACCTTGGAAGTTGAATCTTCT 24845
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
|| || ||| | | || || ||||| || || ||||| | || ||||||
Sbjct 24844 GACACTATTGACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATCCCACCAGATCAA 24785
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
||| | | |||| || || |||||||| |||||| || ||| | | || || ||
Sbjct 24784 CAACGTTTGATTTTCGCTGGTAAACAATTAGAAGATGGTAGAACATTATCTGACTACAAC 24725
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG-CAATAA 111419
|| ||||| |||||||| |||||||||| ||| | | | ||||| ||||||
Sbjct 24724 ATCCAAAAGGAATCTACTTTACATTTAGTCTTGAGATTAAGAGGTGGTCAATAA 24671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 423030343186600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |