Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq1705 178 2e-39
seq1530 159 6e-34
>seq1705
Length=31738
Score = 178 bits (196), Expect = 2e-39
Identities = 167/213 (78%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309
|| || ||||||| || || || ||||||||||| || || || | || || ||||||
Sbjct 13708 AAGACTAAGTGTAAGGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCT 13649
Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369
||||| ||||| || ||||| || | |||||||||||| |||||||| ||||||||||||
Sbjct 13648 TCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCT 13589
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
|| ||||| | ||||| || |||||||| | ||||| ||||| ||||| || ||
Sbjct 13588 TGGATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAGGTAATAGTC 13529
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || || | |||||||||||| || ||||||
Sbjct 13528 TTACCAGTTAAGGTCTTGACGAAAATTTGCATT 13496
>seq1530
Length=119309
Score = 159 bits (176), Expect = 6e-34
Identities = 163/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || || |||| || || || ||||||||||| || || || | ||| || |||||
Sbjct 24692 CAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGATAATGTTCTACCATC 24751
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
|||||| || || || ||||| || | | |||||| || ||||| || |||||||| ||
Sbjct 24752 TTCTAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGTGGGATACCTTCCTTATC 24811
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| || || | |||||| || || ||||| | ||||| |||||||||||||||||
Sbjct 24812 TTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTGATGGT 24871
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | |||||||||||| || |||||
Sbjct 24872 CTTACCGGTTAAGGTCTTGACGAAAATTTGCAT 24904
Score = 152 bits (168), Expect = 9e-32
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309
|| || || |||| || || || ||||||||||| || ||||| | ||| || || |||
Sbjct 24921 AAAACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGATAATGTTCTACCGTCT 24980
Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369
||||| || || || || || || | | |||||| || |||||||| |||||||| |||
Sbjct 24981 TCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATACCTTCCTTATCT 25040
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
|| || || | |||||| || || ||||| | ||||| ||||||||||| |||||
Sbjct 25041 TGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTAATGGTC 25100
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | |||||||||||| || |||||
Sbjct 25101 TTACCAGTTAAGGTCTTGACGAAAATTTGCAT 25132
Score = 150 bits (166), Expect = 3e-31
Identities = 161/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || || |||| || || || ||||||||||| || || || | ||| || |||||
Sbjct 25148 CAAAACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGATAATGTTCTACCATC 25207
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
|||||| || || || || || || | | |||||| || || ||||| |||||||| ||
Sbjct 25208 TTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTTATC 25267
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| || || | |||||| || || ||||| | ||||| |||||||||||||||||
Sbjct 25268 TTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTGATGGT 25327
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | |||||| ||||| || |||||
Sbjct 25328 CTTACCGGTTAAGGTCTTAACGAAAATTTGCAT 25360
Score = 145 bits (160), Expect = 1e-29
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309
|| || || |||| || || || ||||||||||| || ||||| | || || || |||
Sbjct 25377 AACACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCGTCT 25436
Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369
||||| || || || || || || | | |||||| || |||||||| |||||||| |||
Sbjct 25437 TCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATACCTTCCTTATCT 25496
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
|| || || | ||| ||| ||||| ||||| | ||||||||||| ||||| || ||
Sbjct 25497 TGGATTTTAGACTTAACGTTATCGATAGTGTCGGAAGATTCTACTTCTAAGGTAATAGTC 25556
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || || | ||||||||||| || ||||||
Sbjct 25557 TTACCGGTTAAAGTCTTGACGAAAATTTGCATT 25589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921600822515560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |