Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06- 03] 1,873 sequences; 16,614,112 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1705 178 2e-39 seq1530 159 6e-34 >seq1705 Length=31738 Score = 178 bits (196), Expect = 2e-39 Identities = 167/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || || ||||||| || || || ||||||||||| || || || | || || |||||| Sbjct 13708 AAGACTAAGTGTAAGGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCT 13649 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 ||||| ||||| || ||||| || | |||||||||||| |||||||| |||||||||||| Sbjct 13648 TCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCT 13589 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 || ||||| | ||||| || |||||||| | ||||| ||||| ||||| || || Sbjct 13588 TGGATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAGGTAATAGTC 13529 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || || | |||||||||||| || |||||| Sbjct 13528 TTACCAGTTAAGGTCTTGACGAAAATTTGCATT 13496 >seq1530 Length=119309 Score = 159 bits (176), Expect = 6e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || || |||| || || || ||||||||||| || || || | ||| || ||||| Sbjct 24692 CAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGATAATGTTCTACCATC 24751 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||||| || || || ||||| || | | |||||| || ||||| || |||||||| || Sbjct 24752 TTCTAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGTGGGATACCTTCCTTATC 24811 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| || || | |||||| || || ||||| | ||||| ||||||||||||||||| Sbjct 24812 TTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTGATGGT 24871 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | |||||||||||| || ||||| Sbjct 24872 CTTACCGGTTAAGGTCTTGACGAAAATTTGCAT 24904 Score = 152 bits (168), Expect = 9e-32 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || || || |||| || || || ||||||||||| || ||||| | ||| || || ||| Sbjct 24921 AAAACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGATAATGTTCTACCGTCT 24980 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 ||||| || || || || || || | | |||||| || |||||||| |||||||| ||| Sbjct 24981 TCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATACCTTCCTTATCT 25040 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 || || || | |||||| || || ||||| | ||||| ||||||||||| ||||| Sbjct 25041 TGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTAATGGTC 25100 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | |||||||||||| || ||||| Sbjct 25101 TTACCAGTTAAGGTCTTGACGAAAATTTGCAT 25132 Score = 150 bits (166), Expect = 3e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || || |||| || || || ||||||||||| || || || | ||| || ||||| Sbjct 25148 CAAAACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGATAATGTTCTACCATC 25207 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||||| || || || || || || | | |||||| || || ||||| |||||||| || Sbjct 25208 TTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTTATC 25267 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| || || | |||||| || || ||||| | ||||| ||||||||||||||||| Sbjct 25268 TTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTGATGGT 25327 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | |||||| ||||| || ||||| Sbjct 25328 CTTACCGGTTAAGGTCTTAACGAAAATTTGCAT 25360 Score = 145 bits (160), Expect = 1e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || || || |||| || || || ||||||||||| || ||||| | || || || ||| Sbjct 25377 AACACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCGTCT 25436 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 ||||| || || || || || || | | |||||| || |||||||| |||||||| ||| Sbjct 25437 TCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATACCTTCCTTATCT 25496 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 || || || | ||| ||| ||||| ||||| | ||||||||||| ||||| || || Sbjct 25497 TGGATTTTAGACTTAACGTTATCGATAGTGTCGGAAGATTCTACTTCTAAGGTAATAGTC 25556 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || || | ||||||||||| || |||||| Sbjct 25557 TTACCGGTTAAAGTCTTGACGAAAATTTGCATT 25589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921600822515560