Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06- 03] 1,873 sequences; 16,614,112 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq1530 86.0 4e-12 >seq1530 Length=119309 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || | || || ||||| || || ||||||||| ||||| ||| | | Sbjct 25132 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTTGAATCTTCT 25073 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || | ||| ||||| ||||| || ||| | || | | ||| Sbjct 25072 GACACTATTGACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCACCAGATCAA 25013 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | | || |||||||| |||||| ||||||| | ||| | |||| ||||| Sbjct 25012 CAACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACATTATCCGACTACAAC 24953 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || || |||||||||||| | ||| | || ||| | || |||| || Sbjct 24952 ATCCAAAAGGAATCTACTTTACATTTAGTTTTAAGATTGAGAGGTGG 24906 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || |||| || ||||| || || ||||| ||| ||||| ||| | | Sbjct 25360 ATGCAAATTTTCGTTAAGACCTTAACCGGTAAGACCATCACCTTGGAAGTTGAATCTTCT 25301 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || | ||| ||||| ||||| || ||| | ||| | | ||| Sbjct 25300 GACACTATTGACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCTCCAGATCAA 25241 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | | || |||||||| |||||| |||||||| | ||| | | || ||||| Sbjct 25240 CAACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACATTATCTGACTACAAC 25181 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 || || |||||||||||| | ||| | || || Sbjct 25180 ATCCAAAAGGAATCTACTTTACATTTAGTTTT 25149 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||| || | || || ||||| || || || |||||| | ||| ||| | | Sbjct 25589 AATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCTTAGAAGTAGAATCTTC 25530 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || || | | | ||||| ||||| ||||| || ||| | || | | || Sbjct 25529 CGACACTATCGATAACGTTAAGTCTAAAATCCAAGATAAGGAAGGTATTCCACCAGATCA 25470 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 ||| | | || |||||||| |||||| ||||||| | |||| | |||| ||||| Sbjct 25469 ACAACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTTTATCCGACTACAA 25410 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || || |||||||||||| | ||| | || ||| | ||| |||| || Sbjct 25409 CATCCAAAAGGAATCTACTTTACATTTAGTGTTAAGATTAAGAGGTGG 25362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358116625018042