Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq1530 100 3e-16
>seq1530
Length=119309
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | |||||| | |||| ||| | || ||||| ||||| |||||||| || |
Sbjct 25133 ACCACCTCTCAATCTCAAAACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGA 25192
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || | | ||||| | || || || ||| |||| | || || || || |||||
Sbjct 25193 TAATGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGG 25252
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| ||||| || ||||| ||||| ||| ||| || | || ||| | || ||
Sbjct 25253 AATACCTTCCTTATCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 25312
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| | || | |||||| ||||| || || || ||||||||||||||
Sbjct 25313 TTCCAAGGTGATGGTCTTACCGGTTAAGGTCTTAACGAAAATTTGCAT 25360
Score = 100 bits (110), Expect = 3e-16
Identities = 158/225 (70%), Gaps = 1/225 (0%)
Strand=Plus/Plus
Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285
||||| | ||||| ||| | || ||||| ||||| |||||||| || | | || |
Sbjct 25371 AATCTTAACACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTA 25430
Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345
||||||| | || || || ||| |||| | || || || || || ||||| |||||
Sbjct 25431 CCGTCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATACCTTCC 25490
Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405
|| ||||| ||||| ||| || || | || || | || ||||||| ||
Sbjct 25491 TTATCTTGGATTTTAGACTTAACGTTATCGATAGTGTCGGAAGATTCTACTTCTAAGGTA 25550
Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT-TTAAT 64449
| ||||| ||||| ||||| || ||||||||||||||| |||||
Sbjct 25551 ATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATTGTTAAT 25595
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | |||||| | |||| ||| | || ||||| ||||| |||||||| || |
Sbjct 24905 ACCACCTCTCAATCTTAAAACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGA 24964
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || | ||||||| | || || || ||| |||| | || || || || || ||
Sbjct 24965 TAATGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGG 25024
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| ||||| || ||||| ||||| ||| ||| || | || ||| | || ||
Sbjct 25025 AATACCTTCCTTATCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 25084
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| | || | |||||| || || || || || ||||||||||||||
Sbjct 25085 TTCCAAGGTAATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 25132
Score = 82.4 bits (90), Expect = 8e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285
||||| | |||| ||| | || ||||| ||||| |||||||| || | | || |
Sbjct 24687 AATCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGATAATGTTCTA 24746
Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345
| ||||| | || || || || |||| | || || || || || || || |||||
Sbjct 24747 CCATCTTCTAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGTGGGATACCTTCC 24806
Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405
|| ||||| ||||| ||| ||| || | || ||| | || ||||| | ||
Sbjct 24807 TTATCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTG 24866
Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| |||||| ||||| || || || ||||||||||||||
Sbjct 24867 ATGGTCTTACCGGTTAAGGTCTTGACGAAAATTTGCAT 24904
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499633102066120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |