Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq1530 89.7 5e-13
>seq1530
Length=119309
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||||||||||||| | || |||||||| ||||||||||||
Sbjct 24906 CCACCTCTCAATCTTAAAACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGAT 24965
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || | ||||||||| | | | || | ||| ||||| || || ||
Sbjct 24966 AATGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGA 25025
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|||||||| || || |||||| || | |||| || | ||||| | || || ||
Sbjct 25026 ATACCTTCCTTATCTTGGATTTTAGACTTGACATTG-TCAATAGTGTCAGAAGATTCAAC 25084
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | || |||||||| | || || || ||||| |||||
Sbjct 25085 TTCCAAGGTAATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 25132
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC-GCT 138446
|| |||| ||| | |||||||||||||| | || |||||||| ||||||||||| | |
Sbjct 25134 CCACCTCTCAATCTCAAAACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGAT 25193
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| || | || || | ||||||||| | | | || | ||| ||||| || |||||
Sbjct 25194 AAT-GTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGG 25252
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| || || |||||| || | |||| || | ||||| | || || |
Sbjct 25253 AATACCTTCCTTATCTTGGATTTTAGACTTGACATTG-TCAATAGTGTCAGAAGATTCAA 25311
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
| || | || | || ||||| || | || || || ||||| |||||
Sbjct 25312 CTTCCAAGGTGATGGTCTTACCGGTTAAGGTCTTAACGAAAATTTGCAT 25360
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462
|| |||||||||| | || |||||||| |||||||||||| | ||| | |||
Sbjct 25377 AACACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCGTCT 25436
Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522
|| | ||||||||| | | | || | ||| ||||| || || || |||||||| || ||
Sbjct 25437 TCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATACCTTCCTTATCT 25496
Query 138523 GTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTT 138582
|||||| || | | || | ||||||| || || || || | || | ||
Sbjct 25497 TGGATTTTAGACTTAACGTTATCGATAGTGTCGGAAGATTCTACTTCTAAGGTAATAGTC 25556
Query 138583 TTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||| || | ||| || || ||||| |||||
Sbjct 25557 TTACCGGTTAAAGTCTTGACGAAAATTTGCAT 25588
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496250781256560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |