Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq1705 98.7 2e-15
seq1530 91.5 3e-13
>seq1705
Length=31738
Score = 98.7 bits (108), Expect = 2e-15
Identities = 159/228 (70%), Gaps = 3/228 (1%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||| | ||| | ||| | || || |||||||||| ||||||||||| ||||| || ||
Sbjct 13712 TCTTAAGACTAAGTGTAAGGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACC 13653
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||| | ||||| || |||||||| | | || ||||| || ||| |||||
Sbjct 13652 ATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 13593
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || ||||| || || || | |||||| | | ||| || || || || ||
Sbjct 13592 GTCTTGGATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAGGTAAT 13533
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTTAGCCTT 199641
|||||||| || | || || || |||||||| |||||| | |||
Sbjct 13532 AGTCTTACCAGTTAAGGTCTTGACGAAAATTTG---CATTTTTGGCTT 13488
>seq1530
Length=119309
Score = 91.5 bits (100), Expect = 3e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | || | ||| || |||||||||| ||||||||||| || || || ||
Sbjct 24689 TCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGATAATGTTCTACC 24748
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||| | || || || ||||| || | ||| || || || || || |||||
Sbjct 24749 ATCTTCTAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGTGGGATACCTTCCTT 24808
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || || || ||| || || | ||||| | | ||| || ||||| |||||
Sbjct 24809 ATCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTGAT 24868
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||| || | || || || ||||||||
Sbjct 24869 GGTCTTACCGGTTAAGGTCTTGACGAAAATTTG 24901
Score = 91.5 bits (100), Expect = 3e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | || | ||| || |||||||||| ||||||||||| || || || ||
Sbjct 25145 TCTCAAAACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGATAATGTTCTACC 25204
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||| | || || || || || || | ||| || || || ||| ||| |||||
Sbjct 25205 ATCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTT 25264
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || || || ||| || || | ||||| | | ||| || ||||| |||||
Sbjct 25265 ATCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTGAT 25324
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||| || | || || || ||||||||
Sbjct 25325 GGTCTTACCGGTTAAGGTCTTAACGAAAATTTG 25357
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178893308460491
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |