Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06- 03] 1,873 sequences; 16,614,112 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1308 194 2e-44 seq1452 93.3 5e-14 seq1399 93.3 5e-14 >seq1308 Length=6085 Score = 194 bits (214), Expect = 2e-44 Identities = 849/1329 (64%), Gaps = 31/1329 (2%) Strand=Plus/Plus Query 105925 TCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTG 105984 |||||| ||| ||||| | || || |||||||| ||||||||||||||||||||||| Sbjct 3758 TCTTCTGGAATAAATGTTTGAAGTATATGGTTCAAAACATTCATTATTACCCAAGATTTG 3817 Query 105985 TGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACC---CTTTTC 106041 || || || || |||||||| || || | |||||| ||| | | || |||| | Sbjct 3818 TGATGTTGAAGCAGTTGGCATAGGAGCAACCAAAAGTGAGTTTCTTAATCCATGCTTTGC 3877 Query 106042 CTTGATGCGTTCCTTGAGAACATCCCAGTCG--TAGTTGAGCTTGGTTTCACCTTCCCAC 106099 | | | ||| | | | |||||| || || || || ||||||| |||| | Sbjct 3878 CATATTTTGTT---TTAAAGTATCCCAATCCCATAATTCAG-TTGGTTTTCTATTCC-AT 3932 Query 106100 ATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCT 106159 | |||| |||| | | ||||||||| | || ||||| | | | | | ||| | |||| Sbjct 3933 AAATCATATTGTAATAACCCTTGGGATGCTGGTGAACCTTGATAAGATTGATATGGACCT 3992 Query 106160 TGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATA 106219 | ||| || |||||| | || | | ||||| || ||||||||||| || Sbjct 3993 TCTTCTTGGGCTAATTCAATAGAAGTTTCAACAGCAGCGTGGTAAATGGTTTCAAAAATT 4052 Query 106220 CGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA---ATAAAT 106276 || ||| | || ||||||| | |||||||||| ||| | ||| || || Sbjct 4053 TGAATATTTAATTCTCTGGCTTCTTGAGAATCAAATG-GTAAT--CTTAAAGCCATGAAA 4109 Query 106277 ACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGC 106336 |||| || | |||||| || |||||| |||| ||||| | | |||||| || ||| Sbjct 4110 GCATCAGCCAAACCTTGGACCCCCAAAGCAATTGGTCTATTTTTCATATTTGAATTTTTG 4169 Query 106337 GCAGTCTC-AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAAT 106395 || ||| ||| |||||| |||| | ||||| ||| |||| ||| |||||||| Sbjct 4170 GCT-TCTGGAACAGGATAATAATTACGATCAATAACTTTATTTAAATTACGAGTAACAAT 4228 Query 106396 CTTTGTGATTTCATGAAGTTTTTCATAAT-----CAAAAGTGCGAGTC-TCTTCATTGAC 106449 ||| || |||||||| | ||| ||| ||| || | || || |||| | || Sbjct 4229 CTTGGTAATTTCATGTAATTTATCAAAATTATACCATGAATGATCATCATCTTTTTCAAC 4288 Query 106450 ATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTA 106509 | || ||| | ||||||||| || ||||| || ||||| || || || || Sbjct 4289 AAACGCTGGTAAGGCGATTGAAGCTAAATTACAGACAGCAACTTCTTCAGGTGATGAATA 4348 Query 106510 CTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACT 106569 || | |||||| ||| ||||| || ||||| | || ||||||||||| || | Sbjct 4349 TTCAACAATTTCACAACATAAGTTAGATGATTTAATAATACCTAAATTCTTTTGATTGGT 4408 Query 106570 CTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTT 106629 ||||| || || ||||| || || | ||| | || || || || || || || | | Sbjct 4409 CTTTTCATTACAAGCATCTTTATATAACATAAATGGAGTACCAGTTTCAGTTTGGGCTTC 4468 Query 106630 GAGAATTGCCTTCCACACATCGGCGGC--TGGTACAATGGCGTTGGCCCGTCCCTCCGCC 106687 | ||| | | ||| | | || | || || | | | || || || Sbjct 4469 TAAAATGGAATACCATAATTTTTGTGCCTTAATAGTTTGTC--TACCACGACCTTCACGT 4526 Query 106688 TCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCC 106747 || || ||| || | |||||| || ||||| | || | | || || || Sbjct 4527 TCATATTTTTCATATAATTGTTCAAATTCTTCACCATAAACATCAGGTAATCCAGGAGCT 4586 Query 106748 TTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCT 106807 | | || | || | | ||| | |||| | || || |||||||| || | || Sbjct 4587 TCATTAGGGGAAAATAATGTCCAATCACCATTTTGTTCCACACGCTTCATAAATAAATCA 4646 Query 106808 GGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGT 106867 |||||||| | | || || | |||||| | | ||||| | |||||| || | Sbjct 4647 GGAATCCATAATGCTGGGAATAAATCTCTGGCTCTAATTTCTTCTTTACCTTGATTTTTT 4706 Query 106868 CGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGAT 106927 | | |||| || || | ||||| | |||||||| || | ||||| || | || Sbjct 4707 CTAATATCAATAAAATCAAAAATATCTGAATGCCATGGTTCTAAATAGAGGGCAAAAGCA 4766 Query 106928 CCCTTTC---GACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGC 106984 || || | ||| |||||| ||||| || || ||| ||| || || || | | Sbjct 4767 CCTGGTCTCTTATTACCACCTTGATCGACATAACGTGCGGTGTTGTTGAAAACACGTACC 4826 Query 106985 ATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTC 107044 || || |||||||| | || |||||| || || |||| || | | | | Sbjct 4827 ATGGGGATAATACCGTTGGAAGTACCATTAGTACCAGCAATATAAGCCCCAGTAGAACGA 4886 Query 107045 ACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 107104 | || ||| || || | |||||||| ||||| | |||||| || ||||| | Sbjct 4887 ATATTATGAATATGTAAACCAATACCACCAGCACTCTTTGAAATCAATGCACATGTTTTC 4946 Query 107105 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 107164 | ||| |||| || || | ||||| || || || |||| | | ||| || ||| Sbjct 4947 AAAGTATCATAAATCCCATCAATTGAATCATCTTTCATGGCAACTAAGAAACATGACGAC 5006 Query 107165 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT 107224 || || || ||||| ||||| ||||| || | ||||||| | ||| |||| | | Sbjct 5007 ATTTGTGGACTTGGGGTACCGGCATTAAATAAAGTTGGTGAACCATGAGTGAAAAACTTT 5066 Query 107225 TGGGACATC 107233 || |||||| Sbjct 5067 TGTGACATC 5075 >seq1452 Length=85594 Score = 93.3 bits (102), Expect = 5e-14 Identities = 194/288 (67%), Gaps = 17/288 (6%) Strand=Plus/Plus Query 9279 TCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT 9338 ||||||||||||||||| |||||||| || | ||| || |||||||| || || Sbjct 56964 TCAAAACCATCCATCTCAACTAAAAGTTGATTCAAAGTGGTCTCACGTTCATCGTTTGC- 57022 Query 9339 GGCATACCACCAGCACTGCGTT---------GCTTTCCCACGGCATCAATCTCATCAATG 9389 ||||| ||| ||| || |||| || | |||||||| ||||||| Sbjct 57023 -----ACCACTTGCATTGCCTTTGGCACGCAGCTTCCCAATTGCATCAATTTCATCAACA 57077 Query 9390 AAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCG 9449 |||||||| | || |||||| || || ||| || | || || || | || Sbjct 57078 AAGACAATCGAAGGGGCATTTTCACGAGCAGTTTTGAACAAGTCACGTACACGAGATGCA 57137 Query 9450 CCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGAT-GAAGGGGACATT 9508 || ||||| |||||||| || || || | | | ||| | | || ||| || || Sbjct 57138 CCTACACCGACAAACATTTCGACGAATTCAGAACCAGAA-ACAGAATAGAAAGGTACCCC 57196 Query 9509 AGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTgg 9556 | |||||| ||| ||||| ||| |||||||||||||| |||||||| Sbjct 57197 TGCTTCACCAGCAGTGGCTTTGGCAAGAAGAGTCTTACCAGTACCTGG 57244 >seq1399 Length=19921 Score = 93.3 bits (102), Expect = 5e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 155044 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 155103 ||||| |||||||| || || || || | || || |||||||||||| |||||| Sbjct 12871 TATGGCCGTGTTGCCCCTCGTTCAGGATTGGCGGTTAAGCATGGTATTTCTACTGGTGCT 12930 Query 155104 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 155163 || ||||||||| | || |||| ||||||||| ||||| || | || ||||| | || Sbjct 12931 GGAGTTATTGATGCTGATTATAGAGGTGAAGTTAAAGTTGTATTATTTAATCATAGTGAA 12990 Query 155164 AAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAA 155202 || || ||||| || ||| || || | || |||||| Sbjct 12991 AAGGATTTTGAAGTTAAGGTTGGTGAAAGAATTGCACAA 13029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589966987074520