Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq1308 194 2e-44
seq1452 93.3 5e-14
seq1399 93.3 5e-14
>seq1308
Length=6085
Score = 194 bits (214), Expect = 2e-44
Identities = 849/1329 (64%), Gaps = 31/1329 (2%)
Strand=Plus/Plus
Query 105925 TCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTG 105984
|||||| ||| ||||| | || || |||||||| |||||||||||||||||||||||
Sbjct 3758 TCTTCTGGAATAAATGTTTGAAGTATATGGTTCAAAACATTCATTATTACCCAAGATTTG 3817
Query 105985 TGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACC---CTTTTC 106041
|| || || || |||||||| || || | |||||| ||| | | || |||| |
Sbjct 3818 TGATGTTGAAGCAGTTGGCATAGGAGCAACCAAAAGTGAGTTTCTTAATCCATGCTTTGC 3877
Query 106042 CTTGATGCGTTCCTTGAGAACATCCCAGTCG--TAGTTGAGCTTGGTTTCACCTTCCCAC 106099
| | | ||| | | | |||||| || || || || ||||||| |||| |
Sbjct 3878 CATATTTTGTT---TTAAAGTATCCCAATCCCATAATTCAG-TTGGTTTTCTATTCC-AT 3932
Query 106100 ATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCT 106159
| |||| |||| | | ||||||||| | || ||||| | | | | | ||| | ||||
Sbjct 3933 AAATCATATTGTAATAACCCTTGGGATGCTGGTGAACCTTGATAAGATTGATATGGACCT 3992
Query 106160 TGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATA 106219
| ||| || |||||| | || | | ||||| || ||||||||||| ||
Sbjct 3993 TCTTCTTGGGCTAATTCAATAGAAGTTTCAACAGCAGCGTGGTAAATGGTTTCAAAAATT 4052
Query 106220 CGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA---ATAAAT 106276
|| ||| | || ||||||| | |||||||||| ||| | ||| || ||
Sbjct 4053 TGAATATTTAATTCTCTGGCTTCTTGAGAATCAAATG-GTAAT--CTTAAAGCCATGAAA 4109
Query 106277 ACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGC 106336
|||| || | |||||| || |||||| |||| ||||| | | |||||| || |||
Sbjct 4110 GCATCAGCCAAACCTTGGACCCCCAAAGCAATTGGTCTATTTTTCATATTTGAATTTTTG 4169
Query 106337 GCAGTCTC-AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAAT 106395
|| ||| ||| |||||| |||| | ||||| ||| |||| ||| ||||||||
Sbjct 4170 GCT-TCTGGAACAGGATAATAATTACGATCAATAACTTTATTTAAATTACGAGTAACAAT 4228
Query 106396 CTTTGTGATTTCATGAAGTTTTTCATAAT-----CAAAAGTGCGAGTC-TCTTCATTGAC 106449
||| || |||||||| | ||| ||| ||| || | || || |||| | ||
Sbjct 4229 CTTGGTAATTTCATGTAATTTATCAAAATTATACCATGAATGATCATCATCTTTTTCAAC 4288
Query 106450 ATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTA 106509
| || ||| | ||||||||| || ||||| || ||||| || || || ||
Sbjct 4289 AAACGCTGGTAAGGCGATTGAAGCTAAATTACAGACAGCAACTTCTTCAGGTGATGAATA 4348
Query 106510 CTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACT 106569
|| | |||||| ||| ||||| || ||||| | || ||||||||||| || |
Sbjct 4349 TTCAACAATTTCACAACATAAGTTAGATGATTTAATAATACCTAAATTCTTTTGATTGGT 4408
Query 106570 CTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTT 106629
||||| || || ||||| || || | ||| | || || || || || || || | |
Sbjct 4409 CTTTTCATTACAAGCATCTTTATATAACATAAATGGAGTACCAGTTTCAGTTTGGGCTTC 4468
Query 106630 GAGAATTGCCTTCCACACATCGGCGGC--TGGTACAATGGCGTTGGCCCGTCCCTCCGCC 106687
| ||| | | ||| | | || | || || | | | || || ||
Sbjct 4469 TAAAATGGAATACCATAATTTTTGTGCCTTAATAGTTTGTC--TACCACGACCTTCACGT 4526
Query 106688 TCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCC 106747
|| || ||| || | |||||| || ||||| | || | | || || ||
Sbjct 4527 TCATATTTTTCATATAATTGTTCAAATTCTTCACCATAAACATCAGGTAATCCAGGAGCT 4586
Query 106748 TTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCT 106807
| | || | || | | ||| | |||| | || || |||||||| || | ||
Sbjct 4587 TCATTAGGGGAAAATAATGTCCAATCACCATTTTGTTCCACACGCTTCATAAATAAATCA 4646
Query 106808 GGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGT 106867
|||||||| | | || || | |||||| | | ||||| | |||||| || |
Sbjct 4647 GGAATCCATAATGCTGGGAATAAATCTCTGGCTCTAATTTCTTCTTTACCTTGATTTTTT 4706
Query 106868 CGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGAT 106927
| | |||| || || | ||||| | |||||||| || | ||||| || | ||
Sbjct 4707 CTAATATCAATAAAATCAAAAATATCTGAATGCCATGGTTCTAAATAGAGGGCAAAAGCA 4766
Query 106928 CCCTTTC---GACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGC 106984
|| || | ||| |||||| ||||| || || ||| ||| || || || | |
Sbjct 4767 CCTGGTCTCTTATTACCACCTTGATCGACATAACGTGCGGTGTTGTTGAAAACACGTACC 4826
Query 106985 ATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTC 107044
|| || |||||||| | || |||||| || || |||| || | | | |
Sbjct 4827 ATGGGGATAATACCGTTGGAAGTACCATTAGTACCAGCAATATAAGCCCCAGTAGAACGA 4886
Query 107045 ACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 107104
| || ||| || || | |||||||| ||||| | |||||| || ||||| |
Sbjct 4887 ATATTATGAATATGTAAACCAATACCACCAGCACTCTTTGAAATCAATGCACATGTTTTC 4946
Query 107105 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 107164
| ||| |||| || || | ||||| || || || |||| | | ||| || |||
Sbjct 4947 AAAGTATCATAAATCCCATCAATTGAATCATCTTTCATGGCAACTAAGAAACATGACGAC 5006
Query 107165 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT 107224
|| || || ||||| ||||| ||||| || | ||||||| | ||| |||| | |
Sbjct 5007 ATTTGTGGACTTGGGGTACCGGCATTAAATAAAGTTGGTGAACCATGAGTGAAAAACTTT 5066
Query 107225 TGGGACATC 107233
|| ||||||
Sbjct 5067 TGTGACATC 5075
>seq1452
Length=85594
Score = 93.3 bits (102), Expect = 5e-14
Identities = 194/288 (67%), Gaps = 17/288 (6%)
Strand=Plus/Plus
Query 9279 TCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT 9338
||||||||||||||||| |||||||| || | ||| || |||||||| || ||
Sbjct 56964 TCAAAACCATCCATCTCAACTAAAAGTTGATTCAAAGTGGTCTCACGTTCATCGTTTGC- 57022
Query 9339 GGCATACCACCAGCACTGCGTT---------GCTTTCCCACGGCATCAATCTCATCAATG 9389
||||| ||| ||| || |||| || | |||||||| |||||||
Sbjct 57023 -----ACCACTTGCATTGCCTTTGGCACGCAGCTTCCCAATTGCATCAATTTCATCAACA 57077
Query 9390 AAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCG 9449
|||||||| | || |||||| || || ||| || | || || || | ||
Sbjct 57078 AAGACAATCGAAGGGGCATTTTCACGAGCAGTTTTGAACAAGTCACGTACACGAGATGCA 57137
Query 9450 CCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGAT-GAAGGGGACATT 9508
|| ||||| |||||||| || || || | | | ||| | | || ||| || ||
Sbjct 57138 CCTACACCGACAAACATTTCGACGAATTCAGAACCAGAA-ACAGAATAGAAAGGTACCCC 57196
Query 9509 AGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTgg 9556
| |||||| ||| ||||| ||| |||||||||||||| ||||||||
Sbjct 57197 TGCTTCACCAGCAGTGGCTTTGGCAAGAAGAGTCTTACCAGTACCTGG 57244
>seq1399
Length=19921
Score = 93.3 bits (102), Expect = 5e-14
Identities = 116/159 (73%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 155044 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 155103
||||| |||||||| || || || || | || || |||||||||||| ||||||
Sbjct 12871 TATGGCCGTGTTGCCCCTCGTTCAGGATTGGCGGTTAAGCATGGTATTTCTACTGGTGCT 12930
Query 155104 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 155163
|| ||||||||| | || |||| ||||||||| ||||| || | || ||||| | ||
Sbjct 12931 GGAGTTATTGATGCTGATTATAGAGGTGAAGTTAAAGTTGTATTATTTAATCATAGTGAA 12990
Query 155164 AAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAA 155202
|| || ||||| || ||| || || | || ||||||
Sbjct 12991 AAGGATTTTGAAGTTAAGGTTGGTGAAAGAATTGCACAA 13029
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589966987074520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |