Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq1262 104 3e-17
>seq1262
Length=9097
Score = 104 bits (114), Expect = 3e-17
Identities = 329/497 (66%), Gaps = 16/497 (3%)
Strand=Plus/Plus
Query 154599 GATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTAT 154658
|||||||| || || ||| ||| ||| || || | ||| | || ||||| |||
Sbjct 2013 GATATCACTGGTTTCGATGCTACCACATCTATGCCAAATTCTGGAGCCCAAGGTGAATAT 2072
Query 154659 GCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAA---AGAAAT 154715
| || | | | |||| || ||| ||| | | ||| ||| || || |||||
Sbjct 2073 ACCGGGTTATCATTAATCAGAGAATATCATAGATCAAGAGGTGATCATGAATCGAGAAAC 2132
Query 154716 GTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGG 154775
| ||| | || |||| || || ||||| || || || ||| ||||| ||| ||
Sbjct 2133 ATTTGTCTTATTCCAGTTTCTGCTCATGGTACCAACCCAGCTTCTGCTGCTATGTGTGGT 2192
Query 154776 ATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAAGATCTAGAG 154835
|||||||||| ||| || ||| || ||||| || || | | ||| | ||
Sbjct 2193 TTGAAAGTTGTTCCTGTGAAATGTTTAGACAATGGTTCAATTGATTTAATTGATTT-GA- 2250
Query 154836 AAGAAAGCAATCATGAATACATTTGAACTGTC-ATGT---ATTATGATTACATACCCATC 154891
|||||| | | | ||||| | | || |||| |||||||| || || |||||
Sbjct 2251 AAGAAA--AGGCCGAATTACATAAGGATAGTTTATGTTCCATTATGATCACTTATCCATC 2308
Query 154892 TACACATGGTGTATTTGAAACTAACATTAGACA-GATATGTAAGATCGTTCATGACAATG 154950
||| ||||| |||||||| || | | | | | ||| || || |||||| |||||
Sbjct 2309 TACCTATGGTTTATTTGAACCTGGTGTCAAAGAAGCTATTGAA-ATTGTTCATTCCAATG 2367
Query 154951 GTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCAT 155010
||||| || ||||||||||| || ||| | ||||| || || || || || |||
Sbjct 2368 GTGGTTTAGTTTATCTTGATGGTGCCAATATGAATGCTCAAGTTGGTTTAACATCTCCAG 2427
Query 155011 GTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATT-CTGTATTCCACAT 155069
| || | ||||| ||||| |||||| | || | || || || || || | |||| |||
Sbjct 2428 GAGATTTGGGTGCTGATGTTTGTCATTTGAATATCCACAAGACTTTGCTCT-TTCC-CAT 2485
Query 155070 GGAGGTGGAGGTCCTGG 155086
|| ||||| ||||| ||
Sbjct 2486 GGTGGTGGTGGTCCAGG 2502
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579199239180320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |