Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06- 03] 1,873 sequences; 16,614,112 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq1262 104 3e-17 >seq1262 Length=9097 Score = 104 bits (114), Expect = 3e-17 Identities = 329/497 (66%), Gaps = 16/497 (3%) Strand=Plus/Plus Query 154599 GATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTAT 154658 |||||||| || || ||| ||| ||| || || | ||| | || ||||| ||| Sbjct 2013 GATATCACTGGTTTCGATGCTACCACATCTATGCCAAATTCTGGAGCCCAAGGTGAATAT 2072 Query 154659 GCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAA---AGAAAT 154715 | || | | | |||| || ||| ||| | | ||| ||| || || ||||| Sbjct 2073 ACCGGGTTATCATTAATCAGAGAATATCATAGATCAAGAGGTGATCATGAATCGAGAAAC 2132 Query 154716 GTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGG 154775 | ||| | || |||| || || ||||| || || || ||| ||||| ||| || Sbjct 2133 ATTTGTCTTATTCCAGTTTCTGCTCATGGTACCAACCCAGCTTCTGCTGCTATGTGTGGT 2192 Query 154776 ATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAAGATCTAGAG 154835 |||||||||| ||| || ||| || ||||| || || | | ||| | || Sbjct 2193 TTGAAAGTTGTTCCTGTGAAATGTTTAGACAATGGTTCAATTGATTTAATTGATTT-GA- 2250 Query 154836 AAGAAAGCAATCATGAATACATTTGAACTGTC-ATGT---ATTATGATTACATACCCATC 154891 |||||| | | | ||||| | | || |||| |||||||| || || ||||| Sbjct 2251 AAGAAA--AGGCCGAATTACATAAGGATAGTTTATGTTCCATTATGATCACTTATCCATC 2308 Query 154892 TACACATGGTGTATTTGAAACTAACATTAGACA-GATATGTAAGATCGTTCATGACAATG 154950 ||| ||||| |||||||| || | | | | | ||| || || |||||| ||||| Sbjct 2309 TACCTATGGTTTATTTGAACCTGGTGTCAAAGAAGCTATTGAA-ATTGTTCATTCCAATG 2367 Query 154951 GTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCAT 155010 ||||| || ||||||||||| || ||| | ||||| || || || || || ||| Sbjct 2368 GTGGTTTAGTTTATCTTGATGGTGCCAATATGAATGCTCAAGTTGGTTTAACATCTCCAG 2427 Query 155011 GTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATT-CTGTATTCCACAT 155069 | || | ||||| ||||| |||||| | || | || || || || || | |||| ||| Sbjct 2428 GAGATTTGGGTGCTGATGTTTGTCATTTGAATATCCACAAGACTTTGCTCT-TTCC-CAT 2485 Query 155070 GGAGGTGGAGGTCCTGG 155086 || ||||| ||||| || Sbjct 2486 GGTGGTGGTGGTCCAGG 2502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579199239180320