Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06- 03] 1,873 sequences; 16,614,112 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1262 116 4e-21 >seq1262 Length=9097 Score = 116 bits (128), Expect = 4e-21 Identities = 160/217 (74%), Gaps = 5/217 (2%) Strand=Plus/Plus Query 159547 ATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACA-GATATG 159605 |||||||| || ||||||||||| ||||| |||||||| | ||| | | | ||| Sbjct 2289 ATTATGATCACTTATCCATCTACCTATGGTTTATTTGAACCTGGTGTCAAAGAAGCTATT 2348 Query 159606 TAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACA 159665 || ||||||||| ||||||||| || |||||||||||||| ||| | ||||| || Sbjct 2349 GAA-ATTGTTCATTCCAATGGTGGTTTAGTTTATCTTGATGGTGCCAATATGAATGCTCA 2407 Query 159666 GGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAA 159725 || ||| || || ||| | || | ||||| ||||| |||||| | || | || || Sbjct 2408 AGTTGGTTTAACATCTCCAGGAGATTTGGGTGCTGATGTTTGTCATTTGAATATCCACAA 2467 Query 159726 GACATT-CTGTATTCCACATGGAGGTGGAGGTCCTGG 159761 ||| || || | |||| ||||| ||||| ||||| || Sbjct 2468 GACTTTGCTCT-TTCC-CATGGTGGTGGTGGTCCAGG 2502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588037432251280