Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06- 03] 1,873 sequences; 16,614,112 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1387 324 2e-83 >seq1387 Length=15432 Score = 324 bits (358), Expect = 2e-83 Identities = 626/910 (69%), Gaps = 33/910 (4%) Strand=Plus/Plus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 |||||| || |||||||| || ||||| |||| ||||| || || || || | Sbjct 2189 CATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTTACCAGC 2248 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATA------TAGTACT 36985 || ||| |||||||||||||| ||||||||||| |||||| | || ||| Sbjct 2249 TAATGAAATATTTTCCATAAAGTCAAATGGATTTTGAACATTATAAACCTTCTTATTACC 2308 Query 36986 ACATGATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTC 37045 | ||| | | | || | | || ||||||||||| | |||| |||||| | || Sbjct 2309 AAATGCAACTA-----ATAATC-TGTCGGCAACAAATTCAACATATTGACACATCAATTT 2362 Query 37046 ATAGTTTATACCAATTAGTTTTACTGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTA 37104 | |||| ||||| | || | ||||| | |||||| |||| | || |||||| || | Sbjct 2363 ACAGTTCATACCTAATAAACTAACTGGTAATGCATCAGTGAA-ATATTCTTTTTCAAT-A 2420 Query 37105 TTACAGCATCTTTAACTATA---TTAACAATAACTTCTTCAGTTGGGGGATATTTTAAAT 37161 | || || ||| ||| ||| || | | | |||| | ||| || || |||| Sbjct 2421 T--CAACAGCTTCAACAATAATCTTTTCCACGATTTCTGGATCTGGTCTATTGTTCAAAT 2478 Query 37162 ATTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCAT 37221 ||| |||||||| ||||||||| |||||| ||||||||||||| || ||||||| Sbjct 2479 GAGCAAATAATAAACAAGCAAAATCAGTATGTAACCCTTCATCTCTACAAATTAATTCAT 2538 Query 37222 TAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAG 37281 | || || ||||| ||||||||||| |||||||| || | ||| || |||| ||||| | Sbjct 2539 TTGAGAAAGTTAAACCTGGCATTAACCCTCTTTTCTTTAACCAGAAAATTGAGGCAAATG 2598 Query 37282 ATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTG 37341 ||||| |||||||||||||||||| || |||||||| || | | | | | | | | Sbjct 2599 ATCCACTAAAGAAAATACCTTCAACAGCAGCAAATGCAACTAATCTTTCAGC-ATATAAG 2657 Query 37342 AACT-ATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATT 37400 | | | ||||| |||||| || || |||||| || ||| | | | ||| ||| Sbjct 2658 ACTTCAGTATCAGTGATCCATCTTAATGCCCAATCAGCTTTTCTTCTGATACAAGGAATA 2717 Query 37401 GTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACT---ATCTGTTATATAAGTATCA 37457 |||||| || || || |||| | |||| | |||| | |||||||||||| Sbjct 2718 TGTTCAATAGCATTAAA---TAAGTAATCAGCTTCCTTTGGATCTTTAATATAAGTATCA 2774 Query 37458 ATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAA 37517 |||| | ||| ||||||| |||||||||||||| || ||||| ||||| || Sbjct 2775 ATTAAAAGGGAATAAGTTTCAGAATGAATATTTTCAATCATAATTTGAAACCCATAGAAT 2834 Query 37518 CACCTAGCTTCAGATAATTGAACATC-GTTAAAAAACCTCTTAGCTAAGTTTTCATTAAC 37576 | ||||||| | | |||||| || | | ||||| | | | ||| ||||||||||| Sbjct 2835 GATTTAGCTTCTGGAATTTGAACTTCTGCTGAAAAA-TTTTCAATTAAATTTTCATTAAC 2893 Query 37577 TATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATT 37636 || |||||| || |||||||| || | || | || |||| ||||||||||| Sbjct 2894 AATACCATCAGATGCAGCAAAGAATGCTAAGACTCTTGAAATGAAATATCTTTCATCATC 2953 Query 37637 TGATAATTT---TTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCA 37693 ||||| | ||||||||| | ||| || |||||||| ||| ||| | ||||| Sbjct 2954 ATTCAATTTATCTCTCCAATCATGTAAATCCTTACTTAAATCAATTTCTTCAGCAGTCCA 3013 Query 37694 AAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATAT 37753 ||| ||| ||| || || | |||||| |||| || | |||||||| || Sbjct 3014 AAATGATGCTTCTGCTTTCTTGTAAAATTGCCAAATTTCATGATATCTAATTGGAAACAT 3073 Query 37754 TACAAATCTA 37763 ||||||||| Sbjct 3074 AACAAATCTA 3083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592302932382920