Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq1387 324 2e-83
>seq1387
Length=15432
Score = 324 bits (358), Expect = 2e-83
Identities = 626/910 (69%), Gaps = 33/910 (4%)
Strand=Plus/Plus
Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931
|||||| || |||||||| || ||||| |||| ||||| || || || || |
Sbjct 2189 CATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTTACCAGC 2248
Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATA------TAGTACT 36985
|| ||| |||||||||||||| ||||||||||| |||||| | || |||
Sbjct 2249 TAATGAAATATTTTCCATAAAGTCAAATGGATTTTGAACATTATAAACCTTCTTATTACC 2308
Query 36986 ACATGATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTC 37045
| ||| | | | || | | || ||||||||||| | |||| |||||| | ||
Sbjct 2309 AAATGCAACTA-----ATAATC-TGTCGGCAACAAATTCAACATATTGACACATCAATTT 2362
Query 37046 ATAGTTTATACCAATTAGTTTTACTGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTA 37104
| |||| ||||| | || | ||||| | |||||| |||| | || |||||| || |
Sbjct 2363 ACAGTTCATACCTAATAAACTAACTGGTAATGCATCAGTGAA-ATATTCTTTTTCAAT-A 2420
Query 37105 TTACAGCATCTTTAACTATA---TTAACAATAACTTCTTCAGTTGGGGGATATTTTAAAT 37161
| || || ||| ||| ||| || | | | |||| | ||| || || ||||
Sbjct 2421 T--CAACAGCTTCAACAATAATCTTTTCCACGATTTCTGGATCTGGTCTATTGTTCAAAT 2478
Query 37162 ATTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCAT 37221
||| |||||||| ||||||||| |||||| ||||||||||||| || |||||||
Sbjct 2479 GAGCAAATAATAAACAAGCAAAATCAGTATGTAACCCTTCATCTCTACAAATTAATTCAT 2538
Query 37222 TAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAG 37281
| || || ||||| ||||||||||| |||||||| || | ||| || |||| ||||| |
Sbjct 2539 TTGAGAAAGTTAAACCTGGCATTAACCCTCTTTTCTTTAACCAGAAAATTGAGGCAAATG 2598
Query 37282 ATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTG 37341
||||| |||||||||||||||||| || |||||||| || | | | | | | | |
Sbjct 2599 ATCCACTAAAGAAAATACCTTCAACAGCAGCAAATGCAACTAATCTTTCAGC-ATATAAG 2657
Query 37342 AACT-ATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATT 37400
| | | ||||| |||||| || || |||||| || ||| | | | ||| |||
Sbjct 2658 ACTTCAGTATCAGTGATCCATCTTAATGCCCAATCAGCTTTTCTTCTGATACAAGGAATA 2717
Query 37401 GTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACT---ATCTGTTATATAAGTATCA 37457
|||||| || || || |||| | |||| | |||| | ||||||||||||
Sbjct 2718 TGTTCAATAGCATTAAA---TAAGTAATCAGCTTCCTTTGGATCTTTAATATAAGTATCA 2774
Query 37458 ATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAA 37517
|||| | ||| ||||||| |||||||||||||| || ||||| ||||| ||
Sbjct 2775 ATTAAAAGGGAATAAGTTTCAGAATGAATATTTTCAATCATAATTTGAAACCCATAGAAT 2834
Query 37518 CACCTAGCTTCAGATAATTGAACATC-GTTAAAAAACCTCTTAGCTAAGTTTTCATTAAC 37576
| ||||||| | | |||||| || | | ||||| | | | ||| |||||||||||
Sbjct 2835 GATTTAGCTTCTGGAATTTGAACTTCTGCTGAAAAA-TTTTCAATTAAATTTTCATTAAC 2893
Query 37577 TATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATT 37636
|| |||||| || |||||||| || | || | || |||| |||||||||||
Sbjct 2894 AATACCATCAGATGCAGCAAAGAATGCTAAGACTCTTGAAATGAAATATCTTTCATCATC 2953
Query 37637 TGATAATTT---TTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCA 37693
||||| | ||||||||| | ||| || |||||||| ||| ||| | |||||
Sbjct 2954 ATTCAATTTATCTCTCCAATCATGTAAATCCTTACTTAAATCAATTTCTTCAGCAGTCCA 3013
Query 37694 AAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATAT 37753
||| ||| ||| || || | |||||| |||| || | |||||||| ||
Sbjct 3014 AAATGATGCTTCTGCTTTCTTGTAAAATTGCCAAATTTCATGATATCTAATTGGAAACAT 3073
Query 37754 TACAAATCTA 37763
|||||||||
Sbjct 3074 AACAAATCTA 3083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592302932382920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |