Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq1308 226 3e-54
seq1399 93.3 5e-14
seq1180 82.4 9e-11
>seq1308
Length=6085
Score = 226 bits (250), Expect = 3e-54
Identities = 870/1349 (64%), Gaps = 37/1349 (3%)
Strand=Plus/Minus
Query 75289 GATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAG 75348
|||||| ||| | |||| ||| | ||||||| | || ||||| ||||| |||||
Sbjct 5075 GATGTCACAAAAGTTTTTCACTCATGGTTCACCAACTTTATTTAATGCCGGTACCCCAAG 5016
Query 75349 ACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTA 75408
|| || ||||| || ||| | | |||| || || || ||||| | || || ||
Sbjct 5015 TCCACAAATGTCGTCATGTTTCTTAGTTGCCATGAAAGATGATTCAATTGATGGGATTTA 4956
Query 75409 TGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACAT 75468
|| ||| | | ||||| || |||||| | ||||| |||||||| | || ||
Sbjct 4955 TGATACTTTGAAAACATGTGCATTGATTTCAAAGAGTGCTGGTGGTATTGGTTTACATAT 4896
Query 75469 CCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTAT 75528
||| || | | | | | || |||| || || |||||| || | |||||
Sbjct 4895 TCATAATATTCGTTCTACTGGGGCTTATATTGCTGGTACTAATGGTACTTCCAACGGTAT 4836
Query 75529 TATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCGTCG 75588
||| || ||| | || || || ||| ||| || || ||||| |||||| || |
Sbjct 4835 TATCCCCATGGTACGTGTTTTCAACAACACCGCACGTTATGTCGATCAAGGTGGTAATAA 4776
Query 75589 CA----AGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCC 75644
| ||| | | | || |||| || |||||||||||| | ||||| | || ||
Sbjct 4775 GAGACCAGGTG-CTTTTGCCCTCTATTTAGAACCATGGCATTCAGATATTTTTGATTTTA 4717
Query 75645 TTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCC 75704
|||| | || || |||||| | ||||| | | |||||| | || || |
Sbjct 4716 TTGATATTAGAAAAAATCAAGGTAAAGAAGAAATTAGAGCCAGAGATTTATTCCCAGCAT 4657
Query 75705 TGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCT 75764
| |||||||| || | || |||||||| || || | |||| | ||| | | || |
Sbjct 4656 TATGGATTCCTGATTTATTTATGAAGCGTGTGGAACAAAATGGTGATTGGACATTATTTT 4597
Query 75765 GTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACA 75824
|| | | || || || | | || | ||||| || |||||| | ||
Sbjct 4596 CCCCTAATGAAGCTCCTGGATTACCTGATGTTTATGGTGAAGAATTTGAACAATTATATG 4537
Query 75825 CAAAGTATGAAGAGGAGGGTAG----AGCCAATGCGACTGTACCAGCCGCCGATGTT-TG 75879
||| |||||| || ||| | || ||| ||| | || | | | || ||
Sbjct 4536 AAAAATATGAACGTGAAGGTCGTGGTAGACAA----ACTATTA-AGGCACAAAAATTATG 4482
Query 75880 GAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGC 75939
| | | ||| | || | || || || ||||| || |||| |||| | || || |||||
Sbjct 4481 GTATTCCATTTTAGAAGCCCAAACTGAAACTGGTACTCCATTTATGTTATATAAAGATGC 4422
Query 75940 TTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCAC 75999
|||||| | |||| || ||||||||||| || | || || || || | ||
Sbjct 4421 TTGTAATGAAAAGACCAATCAAAAGAATTTAGGTATTATTAAATCATCTAACTTATGTTG 4362
Query 76000 GGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGC 76059
|||||| | || || || || || ||||| || ||||| || ||||||||
Sbjct 4361 TGAAATTGTTGAATATTCATCACCTGAAGAAGTTGCTGTCTGTAATTTAGCTTCAATCGC 4302
Query 76060 CCTTCCAAAGTATGTCAATGAAGA-GACTCGCACTTTTG-----ATTATGAAAAACTTCA 76113
| | ||| || ||| | |||| || || | || ||| ||| ||| | ||
Sbjct 4301 CTTACCAGCGTTTGTTGAAAAAGATGATGATCATTCATGGTATAATTTTGATAAATTACA 4242
Query 76114 TGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCC 76173
|||||| || ||||||||||| ||| |||| ||| ||||| | |||| ||||||
Sbjct 4241 TGAAATTACCAAGATTGTTACTCGTAATTTAAATAAAGTTATTGATCGTAATTATTATCC 4182
Query 76174 CGTTG-AGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAG 76232
||| ||| || ||| || |||||| | | ||||| |||| |||||| || ||||
Sbjct 4181 TGTTCCAGAA-GCCAAAAATTCAAATATGAAAAATAGACCAATTGCTTTGGGGGTCCAAG 4123
Query 76233 GTCTCGCGGATGTATTTAT---TTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGG 76289
|| | || |||| || || ||| | ||| |||||||||| | ||||||| |
Sbjct 4122 GTTTGGCTGATGCTTTCATGGCTTTAAGAT--TAC-CATTTGATTCTCAAGAAGCCAGAG 4066
Query 76290 AGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAAT 76349
| | ||| || || ||||||||||| || ||||| | | || | | |||||
Sbjct 4065 AATTAAATATTCAAATTTTTGAAACCATTTACCACGCTGCTGTTGAAACTTCTATTGAAT 4006
Query 76350 TGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGC 76409
| || ||| ||||| | ||| | | | | | ||||| || || ||||||||| |
Sbjct 4005 TAGCCCAAGAAGAAGGTCCATATCAATCTTATCAAGGTTCACCAGCATCCCAAGGGTTAT 3946
Query 76410 TTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACG--ACTGGGATGTTCTCAA 76467
| || | |||| | ||| | | ||||||| || || || | | |||||| | | ||
Sbjct 3945 TACAATATGATTTATGGAATAGA-AAACCAA-CTGAATTATGGGATTGGGATACTTTAAA 3888
Query 76468 GGAACGCAT--CAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACA 76525
|| || ||| || | || | | ||| |||||| | || || ||||||||
Sbjct 3887 ACAAAATATGGCAA--AGCATGGATTAAGAAACTCACTTTTGGTTGCTCCTATGCCAACT 3830
Query 76526 GCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATC 76585
|| || || ||||||||||||||||||||||||| ||||||||||| || |||||||
Sbjct 3829 GCTTCAACATCACAAATCTTGGGTAATAATGAATGTTTTGAACCATATACTTCAAACATT 3770
Query 76586 TACCTGAGAAGAACCCTCGCAGGTGAGTT 76614
|| |||||| || || ||||| ||
Sbjct 3769 TATTCCAGAAGAGTTCTTGCTGGTGAATT 3741
>seq1399
Length=19921
Score = 93.3 bits (102), Expect = 5e-14
Identities = 116/159 (73%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 27873 TTGTGCGATGCGATCCCCTTTCTTTACCTCAAAGTCTTTGTCTCCGTGATTGAAGAGAAC 27932
|||||| || | || || ||| || ||||| || || || | ||||| || | ||
Sbjct 13029 TTGTGCAATTCTTTCACCAACCTTAACTTCAAAATCCTTTTCACTATGATTAAATAATAC 12970
Query 27933 GACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACCAACTTGAATACCATG 27992
||||| ||||||||| |||| || | ||||||||| || |||||| |||||||||
Sbjct 12969 AACTTTAACTTCACCTCTATAATCAGCATCAATAACTCCAGCACCAGTAGAAATACCATG 12910
Query 27993 CTTCACAGCGAGACCGGATCGTGGTGCAACACGACCATA 28031
||| || || | || || || || |||||||| |||||
Sbjct 12909 CTTAACCGCCAATCCTGAACGAGGGGCAACACGGCCATA 12871
>seq1180
Length=50914
Score = 82.4 bits (90), Expect = 9e-11
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937
|||| |||||| | |||| || || |||||||| |||||||||||||||||||||
Sbjct 28022 TGGATGGCTATATTAGAATCCCAAACCGAGACTGGTGGCCCATATATGCTTTACAAGGAT 28081
Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGG 75972
|||||||| | || || ||||||||||||||
Sbjct 28082 GCTTGTAATGAAAAATCAAATCAAAAGAATTTGGG 28116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596555632814240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |