Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq1387 352 6e-92
seq1530 167 5e-36
seq1705 159 7e-34
>seq1387
Length=15432
Score = 352 bits (390), Expect = 6e-92
Identities = 581/840 (69%), Gaps = 12/840 (1%)
Strand=Plus/Plus
Query 49576 CTAATGATATTAAATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTA 49635
||||||| || | |||||| ||||||||||||| ||||||| || | | ||
Sbjct 2248 CTAATGAAATATTTTCCATAAAGTCAAATGGATTTTGAACATTATAAACCTTCT-TATTA 2306
Query 49636 TCAA-TACATATAATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAA 49694
||| | || ||||||||| ||||| ||||||||||||||||| |||| |||| |||
Sbjct 2307 CCAAATGCAACTAATAATCTGTCGGCAACAAATTCAACATATTGACACATCAATTTACAG 2366
Query 49695 TTCATACCCAATAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctaca 49754
|||||||| ||||| ||| ||||||||||||| | | |||||||||| || || |||
Sbjct 2367 TTCATACCTAATAAACTAACTGGTAATGCATCAGTGAAATATTCTTTTTCAATATCAACA 2426
Query 49755 gcttgtttaattatcataattatattattttttgataatttatatt--taatatgattcg 49812
|||| ||| ||| | || | |||| | ||| | |||| | | |||| |
Sbjct 2427 GCTTCAACAATAATCTT--TTCCACGATTTCTGGATCTGGTCTATTGTTCAAATGA---G 2481
Query 49813 catatattaaACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTAC 49872
|| ||| |||||| ||||||||||||||||| || || || ||| | || ||||||||
Sbjct 2482 CAAATAATAAACAAGCAAAATCAGTATGTAACCCTTCATCTCTACAAATTAATTCATTTG 2541
Query 49873 TAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTAC 49932
|||||||| ||||||||||| ||||| || || | ||| || ||||| ||||| |
Sbjct 2542 AGAAAGTTAAACCTGGCATTAACCCTCTTTTCTTTAACCAGAAAATTGAGGCAAATGATC 2601
Query 49933 TAGAAAAGAATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATT 49992
| |||||| ||||| || ||| |||||||| | || |||| | || | | | ||
Sbjct 2602 CACTAAAGAAAATACCTTCAACAGCAGCAAATGCAACTAATCTTTCAGCATATAAGACTT 2661
Query 49993 TATCATCTAATATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTT 50052
| ||| ||||| ||| |||||||| |||||| || ||||| |||| |||| ||
Sbjct 2662 CAGTATCAGTGATCCATCTTAATGCCCAATCAGCTTTTCTTCTGATACAAGGAATATGTT 2721
Query 50053 CTATAGCTTTAAATAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATA 50112
| ||||| |||||||| | || ||| | ||||| |
Sbjct 2722 CAATAGCATTAAATAAGTAATCAGCTTCCTTTGGATCTTTAATATAAGTATCAATTAAAA 2781
Query 50113 AAGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTG 50172
||||| |||||||||| | | ||| || |||||||| ||| ||| | | |
Sbjct 2782 GGGAATAAGTTTCAGAATGAATATTTTCAATCATAATTTGAAACCCATAGAATGATTTAG 2841
Query 50173 CTTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCAT 50232
|||||| | |||||||| | | || ||||| |||||| ||| ||||||||||
Sbjct 2842 CTTCTGGAATTTGAACTTCTGCTGAAAAATTTTCAATTAAATTTTCATTAACAATACCAT 2901
Query 50233 CAGATGCTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAAAT 50292
||||||| || ||||||||||| || | ||| |||| | |||||| ||| || || |
Sbjct 2902 CAGATGCAGCAAAGAATGCTAAGACTCTTGAAATGAAATATCTTTCATCATCATTCAATT 2961
Query 50293 TTTC---CCAAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATG 50349
| || |||| | | ||| || |||||| | |||||| |||||||||||||
Sbjct 2962 TATCTCTCCAATCATGTAAATCCTTACTTAAATCAATTTCTTCAGCAGTCCAAAATGATG 3021
Query 50350 CTACGGATTTTTTATACATTTGATATATATCAAAATGTTCAATGGGAAATAGTACATATC 50409
|| | | ||| || || | ||| | || ||| || | ||| ||||| | ||| |||
Sbjct 3022 CTTCTGCTTTCTTGTAAAATTGCCAAATTTCATGATATCTAATTGGAAACATAACAAATC 3081
>seq1530
Length=119309
Score = 167 bits (184), Expect = 5e-36
Identities = 175/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | | ||| |||||||||||||||| || || ||| || || ||
Sbjct 24903 ATACCACCTCTCAATCTTAAAACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCG 24962
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|||||||||| | || || ||||||||||||||||| || || | |||||||| |||
Sbjct 24963 GATAATGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGT 25022
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| |||||||| |||||| || ||||| |||| || || |||||
Sbjct 25023 GGAATACCTTCCTTATCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCA 25082
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| | |||||||| ||||||||||| || || | || || |||||
Sbjct 25083 ACTTCCAAGGTAATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 25132
Score = 165 bits (182), Expect = 2e-35
Identities = 175/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | | ||| |||||||||||||||| || || ||| || || ||
Sbjct 25359 ATACCACCTCTTAATCTTAACACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCG 25418
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
||||| |||| | || || ||||||||||||||||| || || | |||||||| |||
Sbjct 25419 GATAAAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGT 25478
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| |||||||| |||||| || || ||| |||| || || ||||||
Sbjct 25479 GGAATACCTTCCTTATCTTGGATTTTAGACTTAACGTTATCGATAGTGTCGGAAGATTCT 25538
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
||||||| ||||| || ||||| ||||| || || | || || ||||||
Sbjct 25539 ACTTCTAAGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATT 25589
Score = 163 bits (180), Expect = 6e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | | || |||||||||||||||| || || ||| || || |||
Sbjct 25131 ATACCACCTCTCAATCTCAAAACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCA 25190
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|||||||||| |||| || ||||||||||||||||| || || | |||||||| ||
Sbjct 25191 GATAATGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGA 25250
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| |||||||| |||||| || ||||| |||| || || |||||
Sbjct 25251 GGAATACCTTCCTTATCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCA 25310
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| | || ||||| ||||| ||||| || |||| || || |||||
Sbjct 25311 ACTTCCAAGGTGATGGTCTTACCGGTTAAGGTCTTAACGAAAATTTGCAT 25360
Score = 154 bits (170), Expect = 3e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | || |||||||||||||||| || || ||| || || |||||
Sbjct 24677 ACCACCTCTTAATCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGA 24736
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
|||||||| |||| || |||||||||||||| || || || | |||||||| |||||
Sbjct 24737 TAATGTTCTACCATCTTCTAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGTGG 24796
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| ||||| |||||||| |||||| || ||||| |||| || || ||||| ||
Sbjct 24797 GATACCTTCCTTATCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 24856
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||| | || ||||| ||||| ||||| || || | || || |||||
Sbjct 24857 TTCCAAGGTGATGGTCTTACCGGTTAAGGTCTTGACGAAAATTTGCAT 24904
>seq1705
Length=31738
Score = 159 bits (176), Expect = 7e-34
Identities = 174/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | ||| ||||| ||||| |||| || || ||| || || |||||
Sbjct 13724 ACCACCTCTTAATCTTAAGACTAAGTGTAAGGTAGATTCCTTTTGGATGTTGTAGTCAGA 13665
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
||| |||| |||| || ||||| |||||||| ||||||||||| ||||| ||||||||
Sbjct 13664 TAAAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGG 13605
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| ||||| || ||||| || || ||| ||||| || | || || ||||| ||
Sbjct 13604 AATACCTTCCTTGTCTTGGATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAAC 13545
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
||||| ||||| || ||||||||||| || || | || || ||||||||
Sbjct 13544 TTCTAAGGTAATAGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCATTTT 13494
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984456374633550
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