Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06- 03] 1,873 sequences; 16,614,112 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq1163 136 5e-27 seq1180 93.3 5e-14 >seq1163 Length=41016 Score = 136 bits (150), Expect = 5e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 172408 TATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTTAAAGTTT 172467 ||||| || || ||||| |||||| | || |||| ||| | |||||| || ||| Sbjct 8178 TATGGTTTGTTGCTGGTTCGACTGATGCCAAGTTGTTAAGTGAAAAAGGTGTCAAGATTT 8119 Query 172468 GGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGAAAAGAAG 172527 || | | ||||||||||||||||| ||| || | || || ||||| | ||||| Sbjct 8118 GGGAAGGTAATGGTTCTCGTGAATATTTGGACAATTTGGGATTAACTGATCGTCGAGAAG 8059 Query 172528 GTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATATATCGACT 172587 |||||||||| || ||||||| || |||||||||||| || ||| | |||| || | Sbjct 8058 GTGATTTAGGTCCGGTTTATGGGTTCCAATGGAGACATTTTGGAGCTGAGTATAAAGATT 7999 Query 172588 GTGATACAGATTACACAGGACAAGGAGTGGACCAATTA 172625 ||||||| ||||| || || |||||| ||||||||| Sbjct 7998 GTGATACTGATTATACTGGTCAAGGATATGACCAATTA 7961 >seq1180 Length=50914 Score = 93.3 bits (102), Expect = 5e-14 Identities = 153/218 (70%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 194623 AAACACATGGTTAAGGATAAAATGCATGCTAGA---AGTCATGGGCAAGTAACTACTTTA 194679 || || |||||| ||||||||||||||| ||| || | || |||| | | |||| Sbjct 34441 AAGCATATGGTTTTGGATAAAATGCATGCAAGAGCAAG--AGGGCCAAG-AGCAGTTTTA 34497 Query 194680 CATCGACAACCAAATTGTGGTCGTTCTCAAGGTGGAGGTTTAAGATTTGGAGAAATGGAA 194739 ||||||||| ||| | || || ||| ||||| ||||| |||||||||||| Sbjct 34498 ACCAGACAACCAACCGAAGGTAGATCAAGAGATGGTGGTTTGAGATTGGGAGAAATGGAA 34557 Query 194740 AAAGACTGTATTTTAGTCCATGGTGCTACTCAATTCTTAAATGAAAGAATGTTTTTGTAT 194799 | ||| ||| || ||| ||||||| ||||||| ||| |||||| | | | | Sbjct 34558 AGAGATTGTGTTATAGCATATGGTGCCTCTCAATTGTTATTGGAAAGATTAATGATATCA 34617 Query 194800 TCTGATCCTTTTCAAGTCGATGTTTGCACAGAATGTGG 194837 |||||| | ||| |||| ||| |||| | ||||||| Sbjct 34618 TCTGATGCATTTGAAGTTGATATTTGTAATAAATGTGG 34655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632474791837240