Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_021901.1
Length=197693
Score E
Sequences producing significant alignments: (Bits) Value
seq1163 136 5e-27
seq1180 93.3 5e-14
>seq1163
Length=41016
Score = 136 bits (150), Expect = 5e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 172408 TATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTTAAAGTTT 172467
||||| || || ||||| |||||| | || |||| ||| | |||||| || |||
Sbjct 8178 TATGGTTTGTTGCTGGTTCGACTGATGCCAAGTTGTTAAGTGAAAAAGGTGTCAAGATTT 8119
Query 172468 GGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGAAAAGAAG 172527
|| | | ||||||||||||||||| ||| || | || || ||||| | |||||
Sbjct 8118 GGGAAGGTAATGGTTCTCGTGAATATTTGGACAATTTGGGATTAACTGATCGTCGAGAAG 8059
Query 172528 GTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATATATCGACT 172587
|||||||||| || ||||||| || |||||||||||| || ||| | |||| || |
Sbjct 8058 GTGATTTAGGTCCGGTTTATGGGTTCCAATGGAGACATTTTGGAGCTGAGTATAAAGATT 7999
Query 172588 GTGATACAGATTACACAGGACAAGGAGTGGACCAATTA 172625
||||||| ||||| || || |||||| |||||||||
Sbjct 7998 GTGATACTGATTATACTGGTCAAGGATATGACCAATTA 7961
>seq1180
Length=50914
Score = 93.3 bits (102), Expect = 5e-14
Identities = 153/218 (70%), Gaps = 6/218 (3%)
Strand=Plus/Plus
Query 194623 AAACACATGGTTAAGGATAAAATGCATGCTAGA---AGTCATGGGCAAGTAACTACTTTA 194679
|| || |||||| ||||||||||||||| ||| || | || |||| | | ||||
Sbjct 34441 AAGCATATGGTTTTGGATAAAATGCATGCAAGAGCAAG--AGGGCCAAG-AGCAGTTTTA 34497
Query 194680 CATCGACAACCAAATTGTGGTCGTTCTCAAGGTGGAGGTTTAAGATTTGGAGAAATGGAA 194739
||||||||| ||| | || || ||| ||||| ||||| ||||||||||||
Sbjct 34498 ACCAGACAACCAACCGAAGGTAGATCAAGAGATGGTGGTTTGAGATTGGGAGAAATGGAA 34557
Query 194740 AAAGACTGTATTTTAGTCCATGGTGCTACTCAATTCTTAAATGAAAGAATGTTTTTGTAT 194799
| ||| ||| || ||| ||||||| ||||||| ||| |||||| | | | |
Sbjct 34558 AGAGATTGTGTTATAGCATATGGTGCCTCTCAATTGTTATTGGAAAGATTAATGATATCA 34617
Query 194800 TCTGATCCTTTTCAAGTCGATGTTTGCACAGAATGTGG 194837
|||||| | ||| |||| ||| |||| | |||||||
Sbjct 34618 TCTGATGCATTTGAAGTTGATATTTGTAATAAATGTGG 34655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632474791837240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |