Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq1530 136 4e-27
seq1705 109 5e-19
>seq1530
Length=119309
Score = 136 bits (150), Expect = 4e-27
Identities = 165/222 (74%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|| ||||| || || | || || |||||||||| |||||||| | ||||||||| |
Sbjct 25591 ACAATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCTTAGAAGTAGAATCT 25532
Query 24761 ACCGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGA 24819
||||||| | || |||| ||| | ||| |||||||| || ||||| || || || ||
Sbjct 25531 TCCGACACTATCGATAACGTTAAGTCTAAA-ATCCAAGATAAGGAAGGTATTCCACCAGA 25473
Query 24820 TCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTA 24879
||||||||||||||| ||||| || ||||| | || || |||| | || || ||
Sbjct 25472 TCAACAACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTTTATCCGACTA 25413
Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
||||| ||||||||||| || |||| || ||||| ||||
Sbjct 25412 CAACATCCAAAAGGAATCTACTTTACATTTAGTGTTAAGATT 25371
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || |||| || |||||||||| || || || | ||||| ||| | |
Sbjct 25360 ATGCAAATTTTCGTTAAGACCTTAACCGGTAAGACCATCACCTTGGAAGTTGAATCTTCT 25301
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || || |||||||| || ||||| || ||||| ||||||
Sbjct 25300 GACACTATTGACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCTCCAGATCAA 25241
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||||||||||| ||||| || ||||| | || ||| |||| | || || || |||
Sbjct 25240 CAACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACATTATCTGACTACAAC 25181
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| ||||||||||| || |||| || || ||| ||||| | || ||
Sbjct 25180 ATCCAAAAGGAATCTACTTTACATTTAGTTTTGAGATTGAGAGGTGG 25134
Score = 109 bits (120), Expect = 5e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | || || |||||||||| || || || | ||||| ||| | |
Sbjct 24904 ATGCAAATTTTCGTCAAGACCTTAACCGGTAAGACCATCACCTTGGAAGTTGAATCTTCT 24845
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || || |||||||| || ||||| || || || ||||||
Sbjct 24844 GACACTATTGACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATCCCACCAGATCAA 24785
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||||||||||| || || || ||||| | || ||| |||| | || || || |||
Sbjct 24784 CAACGTTTGATTTTCGCTGGTAAACAATTAGAAGATGGTAGAACATTATCTGACTACAAC 24725
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
|| ||||||||||| || |||| || || ||| ||||
Sbjct 24724 ATCCAAAAGGAATCTACTTTACATTTAGTCTTGAGATT 24687
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | || || |||| ||||| || ||||| | ||||| ||| | |
Sbjct 25132 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTTGAATCTTCT 25073
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || || |||||||| || ||||| || || || ||||||
Sbjct 25072 GACACTATTGACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCACCAGATCAA 25013
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||||||||||| ||||| || ||||| | || || |||| | || || || |||
Sbjct 25012 CAACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACATTATCCGACTACAAC 24953
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| ||||||||||| || |||| || || || ||||| | || ||
Sbjct 24952 ATCCAAAAGGAATCTACTTTACATTTAGTTTTAAGATTGAGAGGTGG 24906
>seq1705
Length=31738
Score = 109 bits (120), Expect = 5e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | || || |||| ||||| |||||||| | ||||| ||| | |
Sbjct 13497 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 13556
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| |||||||||||||| ||||| || || || || |||
Sbjct 13557 GACACCATTGACAATGTCAAATCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 13616
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | || ||||| || || || || | || ||| |||| | || || || |||
Sbjct 13617 CAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTACAAC 13676
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
|| ||||||||||| || ||||||| || || ||||
Sbjct 13677 ATCCAAAAGGAATCTACCTTACACTTAGTCTTAAGATT 13714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449887066772440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |