Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq1530 98.7 8e-16
seq1705 91.5 1e-13
>seq1530
Length=119309
Score = 98.7 bits (108), Expect = 8e-16
Identities = 162/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 110266 ATTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGA 110325
||| | ||||||||| || ||||| ||||||||||| || || |||||| | ||| ||
Sbjct 25595 ATTAACAATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCTTAGAAGTAGA 25536
Query 110326 GCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGT 110385
|| ||| ||| ||| | || || || || || || ||||| | ||
Sbjct 25535 ATCTTCCGACACTATCGATAACGTTAAGTCTAAAATCCAAGATAAGGAAGGTATTCCACC 25476
Query 110386 GGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGA 110445
||||||||| | | |||| ||| |||||||| | || || | ||||| | | ||
Sbjct 25475 AGATCAACAACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTTTATCCGA 25416
Query 110446 TTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|||||||| ||||| |||||||| || || | ||||||||| | |||| ||
Sbjct 25415 CTACAACATCCAAAAGGAATCTACTTTACATTTAGTGTTAAGATTAAGAGGTGG 25362
>seq1705
Length=31738
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329
||||||||||| || ||||| || ||||| || || || |||||| | ||| || ||
Sbjct 13494 AAAATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCT 13553
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
|| || | | | | || ||| ||||| ||||| ||||| | || ||
Sbjct 13554 TCTGACACCATTGACAATGTCAAATCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 13613
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
||||||||| | || | || ||||| || | || |||| ||||| | | || |||
Sbjct 13614 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTAC 13673
Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||| ||||| |||||||| || ||| | || |||||| | |||| ||
Sbjct 13674 AACATCCAAAAGGAATCTACCTTACACTTAGTCTTAAGATTAAGAGGTGG 13723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412832175987389
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |