Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq1530 163 4e-35
>seq1530
Length=119309
Score = 163 bits (180), Expect = 4e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | || || ||||| || || || ||||| | || |||||| | ||
Sbjct 25587 TGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCTTAGAAGTAGAATCTTCCG 25528
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| ||||| | || || || |||||| ||| ||| ||||| |||||||| |||||||
Sbjct 25527 ACACTATCGATAACGTTAAGTCTAAAATCCAAGATAAGGAAGGTATTCCACCAGATCAAC 25468
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | | |||||||| |||||||||||||| || |||||| ||| | || || || |
Sbjct 25467 AACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTTTATCCGACTACAACA 25408
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| ||||| ||||| ||| | |||||||| ||| |||||||||| ||||
Sbjct 25407 TCCAAAAGGAATCTACTTTACATTTAGTGTTAAGATTAAGAGGTGGTA 25360
Score = 159 bits (176), Expect = 5e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | || || ||||| || || || ||||| | || || ||| | |
Sbjct 25131 TGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTTGAATCTTCTG 25072
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||||| | ||||| || |||||| ||| ||| ||||| |||||||| |||||||
Sbjct 25071 ACACTATTGACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCACCAGATCAAC 25012
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | | |||||||| |||||||||||||| || |||||| ||| | || || || |
Sbjct 25011 AACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACATTATCCGACTACAACA 24952
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| ||||| ||||| ||| | |||||||| ||| |||| ||||| ||||
Sbjct 24951 TCCAAAAGGAATCTACTTTACATTTAGTTTTAAGATTGAGAGGTGGTA 24904
Score = 154 bits (170), Expect = 2e-32
Identities = 174/233 (75%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | || || ||||| || || || || || | || || ||| | |
Sbjct 24903 TGCAAATTTTCGTCAAGACCTTAACCGGTAAGACCATCACCTTGGAAGTTGAATCTTCTG 24844
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||||| | ||||| || |||||| ||| ||| ||||| || ||||| |||||||
Sbjct 24843 ACACTATTGACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATCCCACCAGATCAAC 24784
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | | ||||| || |||||||||||||| ||| |||||| ||| | || || || |
Sbjct 24783 AACGTTTGATTTTCGCTGGTAAACAATTAGAAGATGGTAGAACATTATCTGACTACAACA 24724
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAA 146264
| ||||| ||||| ||| | |||||||| || |||||||||| ||| |||||
Sbjct 24723 TCCAAAAGGAATCTACTTTACATTTAGTCTTGAGATTAAGAGGTGGTCAATAA 24671
Score = 150 bits (166), Expect = 3e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | || || ||||| || || || || || | || || ||| | |
Sbjct 25359 TGCAAATTTTCGTTAAGACCTTAACCGGTAAGACCATCACCTTGGAAGTTGAATCTTCTG 25300
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||||| | ||||| || |||||| ||| ||| ||||| ||||| || |||||||
Sbjct 25299 ACACTATTGACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCTCCAGATCAAC 25240
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | | |||||||| |||||||||||||| ||| |||||| ||| | || || || |
Sbjct 25239 AACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACATTATCTGACTACAACA 25180
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| ||||| ||||| ||| | |||||||| || |||| ||||| ||||
Sbjct 25179 TCCAAAAGGAATCTACTTTACATTTAGTTTTGAGATTGAGAGGTGGTA 25132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786147993879160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |