Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq1705 118 8e-22
seq1530 116 3e-21
>seq1705
Length=31738
Score = 118 bits (130), Expect = 8e-22
Identities = 146/200 (73%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649
|| ||||| ||||| ||||| || || | | || | | ||| || | ||| || |||
Sbjct 13693 GTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTGCTTACCA 13634
Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTG 29709
|| | || |||||||| || || || |||||||| || |||||||| | || ||||
Sbjct 13633 GCGAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGATTTG 13574
Query 29710 ACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTT 29769
||| | || | ||||||||| ||| ||||| | || ||||| || |||||||||||
Sbjct 13573 ACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCAGTTAAGGTC 13514
Query 29770 TTAACAAATATCTGCATTTT 29789
|| || || || ||||||||
Sbjct 13513 TTGACGAAAATTTGCATTTT 13494
>seq1530
Length=119309
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | | || ||||| | || ||||| ||||| ||||| || || |
Sbjct 24906 CCACCTCTCAATCTTAAAACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGAT 24965
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | || || | |||||| |||||| | ||||| | ||| ||||| || |||
Sbjct 24966 AATGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGA 25025
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| || || ||||| | ||| |||||| | || | |||||||||| ||| |||
Sbjct 25026 ATACCTTCCTTATCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 25085
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | || || || || ||||||||||| || || || || |||||
Sbjct 25086 TCCAAGGTAATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 25132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385210406529093
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |