Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq1163 141 1e-28
seq1180 89.7 7e-13
>seq1163
Length=41016
Score = 141 bits (156), Expect = 1e-28
Identities = 231/330 (70%), Gaps = 2/330 (1%)
Strand=Plus/Minus
Query 168549 GGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTTAAAGTTTGGAACGATAATGGT 168608
||||| |||||| | || |||| ||| | |||||| || ||||| | | |||||||
Sbjct 8164 GGTTCGACTGATGCCAAGTTGTTAAGTGAAAAAGGTGTCAAGATTTGGGAAGGTAATGGT 8105
Query 168609 TCTCGTGAATTTTTAGATTTATGTGGTTTTACCGAAAGAAAAGAAGGTGATTTAGGTCCA 168668
|||||||||| ||| || | || || || || | ||||||||||||||||||
Sbjct 8104 TCTCGTGAATATTTGGACAATTTGGGATTAACTGATCGTCGAGAAGGTGATTTAGGTCCG 8045
Query 168669 ATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGACTGTGATACAGATTAC 168728
||||||| || |||||||||||| |||||| | |||| || |||||||| |||||
Sbjct 8044 GTTTATGGGTTCCAATGGAGACATTTTGGAGCTGAGTATAAAGATTGTGATACTGATTAT 7985
Query 168729 ACCGGACAAGGAGTAGACCAATTAAGTCAAACTATAAATACTTTACACAACAATCCGGAA 168788
|| || |||||| ||||||||| | ||||| | ||| | | ||||| |
Sbjct 7984 ACTGGTCAAGGATATGACCAATTACACGACGTGATAAAAAAATTAAAGACAAATCCATAT 7925
Query 168789 AATAGAAGAATATTAATTAATAGTTGGGATGTACCACAACTTGATAAAATGGTTCTTCCC 168848
|||||||||| | || | |||| || || | ||| || |||| ||||||
Sbjct 7924 GATAGAAGAATTATTATGTCTGCTTGGAATCCGCCTGATTTTGCAAAGATGGCTCTTCCA 7865
Query 168849 CCTTGTCA-CACTTTAGTGCAATTTTATGT 168877
|| ||||| ||| || ||||| |||||
Sbjct 7864 CCATGTCATGTCTTCTGT-CAATTCTATGT 7836
>seq1180
Length=50914
Score = 89.7 bits (98), Expect = 7e-13
Identities = 172/251 (69%), Gaps = 6/251 (2%)
Strand=Plus/Plus
Query 193794 ATTTTTATAGGGCCAACTTATTATCATCGTCTTAAACATATGGTTAAGGATAAAATGCAT 193853
||||| | || || | ||| ||||| | || ||||||||| |||||||||||||
Sbjct 34408 ATTTTCTTTGGACCGATTTACTATCAAAAATTGAAGCATATGGTTTTGGATAAAATGCAT 34467
Query 193854 GCTAGA---AGTCATGGACAAGTGACTACTTTACATCGACAACCAAATTGTGGTCGTTCT 193910
|| ||| || | || |||| | | |||| ||||||||| ||| | ||
Sbjct 34468 GCAAGAGCAAG--AGGGCCAAGAG-CAGTTTTAACCAGACAACCAACCGAAGGTAGATCA 34524
Query 193911 CAAGGTGGAGGTTTAAGATTTGGAGAAATGGAGAAAGACTGTATTTTAGTTCATGGTGCT 193970
|| ||| ||||| ||||| ||||||||||| | ||| ||| || ||| |||||||
Sbjct 34525 AGAGATGGTGGTTTGAGATTGGGAGAAATGGAAAGAGATTGTGTTATAGCATATGGTGCC 34584
Query 193971 ACTCAATTCTTGAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTGC 194030
||||||| || |||||| | | | | |||||| | ||| |||| ||| ||||
Sbjct 34585 TCTCAATTGTTATTGGAAAGATTAATGATATCATCTGATGCATTTGAAGTTGATATTTGT 34644
Query 194031 ACAGAATGTGG 194041
| |||||||
Sbjct 34645 AATAAATGTGG 34655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635162728904440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |