Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_023613.1
Length=204815
Score E
Sequences producing significant alignments: (Bits) Value
seq1163 131 2e-25
seq1180 84.2 3e-11
>seq1163
Length=41016
Score = 131 bits (144), Expect = 2e-25
Identities = 223/318 (70%), Gaps = 4/318 (1%)
Strand=Plus/Minus
Query 180464 AATTTGTTAAATGATATTGGTGTTAAAGTGTGGAATGATAATGGTTCGCGTAAGTTTTTA 180523
|| ||||||| ||| | ||||| || | ||| | | ||||||||| ||| | | |||
Sbjct 8149 AAGTTGTTAAGTGAAAAAGGTGTCAAGATTTGGGAAGGTAATGGTTCTCGTGAATATTTG 8090
Query 180524 GATTCTTGTGGATTTCATTTTCGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAA 180583
|| || ||||| | ||| ||||||||||||||| || ||||||| || |||
Sbjct 8089 GACAATTTGGGATTAACTGATCGTCGAGAAGGTGATTTAGGTCCGGTTTATGGGTTCCAA 8030
Query 180584 TGGAGACATGCAGGAGCTCAATATATTGACTGTGATACCAACTATATCGGGCAAGGTATA 180643
||||||||| |||||| | |||| || |||||||| | |||| || ||||| |||
Sbjct 8029 TGGAGACATTTTGGAGCTGAGTATAAAGATTGTGATACTGATTATACTGGTCAAGG-ATA 7971
Query 180644 -GACCAATTAAGCCAAGTTATAGAAACTATAAAAAATAATCCCGAATGCCGAAGAATAAT 180702
||||||||| | | || ||| ||| |||| | ||||| | ||||||| ||
Sbjct 7970 TGACCAATTACACGACGTGATAAAAAAATTAAAGACAAATCCATATGATAGAAGAATTAT 7911
Query 180703 CATAGATAGTTGGAATGTATCACAATTACCAGATATGGCTCTTCCACCATGTCACTGT-T 180761
|| | ||||||| | | || || | |||||||||||||||||||| ||| |
Sbjct 7910 TATGTCTGCTTGGAATCCGCCTGATTTTGCAAAGATGGCTCTTCCACCATGTCA-TGTCT 7852
Query 180762 TGGTACAATTTTATGTTA 180779
| ||||| |||||||
Sbjct 7851 TCTGTCAATTCTATGTTA 7834
>seq1180
Length=50914
Score = 84.2 bits (92), Expect = 3e-11
Identities = 171/251 (68%), Gaps = 6/251 (2%)
Strand=Plus/Plus
Query 201921 ATTTTTATAGGCCCAACATACTATCATCGTCTTAAACATATGGTTAAGGATAAAATGCAT 201980
||||| | || || | |||||||| | || ||||||||| |||||||||||||
Sbjct 34408 ATTTTCTTTGGACCGATTTACTATCAAAAATTGAAGCATATGGTTTTGGATAAAATGCAT 34467
Query 201981 GCGAGA---AGTCATGGTCAAGTAACAACATTACATCGTCAACCAAACTGTGGTCGGTCC 202037
|| ||| || | || |||| | || ||| | ||||||| | ||| | ||
Sbjct 34468 GCAAGAGCAAG--AGGGCCAAG-AGCAGTTTTAACCAGACAACCAACCGAAGGTAGATCA 34524
Query 202038 CAAGGTGGTGGATTAAGATTTGGAGAAATGGAAAAAGATTGTATTTTGGTTCATGGGGCC 202097
|| |||||| || ||||| ||||||||||||| ||||||| || | | |||| |||
Sbjct 34525 AGAGATGGTGGTTTGAGATTGGGAGAAATGGAAAGAGATTGTGTTATAGCATATGGTGCC 34584
Query 202098 ACACAATTTTTAAATGAAAGAATGTTTTTGTATTCAGATCCTTTTCAAATCGATGTGTGT 202157
| ||||| ||| |||||| | | | | || ||| | ||| || | ||| | |||
Sbjct 34585 TCTCAATTGTTATTGGAAAGATTAATGATATCATCTGATGCATTTGAAGTTGATATTTGT 34644
Query 202158 ACAAATTGTGG 202168
| || |||||
Sbjct 34645 AATAAATGTGG 34655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 655264658257000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |