Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_023615.1
Length=196456
Score E
Sequences producing significant alignments: (Bits) Value
seq1163 140 4e-28
seq1180 93.3 5e-14
>seq1163
Length=41016
Score = 140 bits (154), Expect = 4e-28
Identities = 172/235 (73%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 171603 TATCCTTAAAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGA 171662
|||| || | || || ||||| || || ||||| |||||| | || |||| |||
Sbjct 8195 TATCATTCATGAGCTCCTATGGTTTGTTGCTGGTTCGACTGATGCCAAGTTGTTAAGTGA 8136
Query 171663 TATAGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTT 171722
| |||||| || ||||| | | ||||||||||||||||| ||| || | || ||
Sbjct 8135 AAAAGGTGTCAAGATTTGGGAAGGTAATGGTTCTCGTGAATATTTGGACAATTTGGGATT 8076
Query 171723 TACTGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGG 171782
||||| | |||||||||||||||||| ||||||| || |||||||||||| ||
Sbjct 8075 AACTGATCGTCGAGAAGGTGATTTAGGTCCGGTTTATGGGTTCCAATGGAGACATTTTGG 8016
Query 171783 GGCTCAATATATCGACTGTTATACAGATTACACAGGACAAGGAGTGGACCAATTA 171837
||| | |||| || ||| |||| ||||| || || |||||| |||||||||
Sbjct 8015 AGCTGAGTATAAAGATTGTGATACTGATTATACTGGTCAAGGATATGACCAATTA 7961
>seq1180
Length=50914
Score = 93.3 bits (102), Expect = 5e-14
Identities = 153/218 (70%), Gaps = 6/218 (3%)
Strand=Plus/Plus
Query 193380 AAACACATGGTTAAGGATAAAATGCATGCTAGA---AGTCATGGGCAAGTGACTACTTTA 193436
|| || |||||| ||||||||||||||| ||| || | || |||| | | ||||
Sbjct 34441 AAGCATATGGTTTTGGATAAAATGCATGCAAGAGCAAG--AGGGCCAAGAG-CAGTTTTA 34497
Query 193437 CATCGACAACCAAATTGTGGTCGTTCTCAAGGTGGAGGTTTAAGATTTGGAGAAATGGAA 193496
||||||||| ||| | || || ||| ||||| ||||| ||||||||||||
Sbjct 34498 ACCAGACAACCAACCGAAGGTAGATCAAGAGATGGTGGTTTGAGATTGGGAGAAATGGAA 34557
Query 193497 AAAGACTGTATTTTAGTCCATGGTGCTACTCAATTCTTAAATGAAAGAATGTTTTTGTAT 193556
| ||| ||| || ||| ||||||| ||||||| ||| |||||| | | | |
Sbjct 34558 AGAGATTGTGTTATAGCATATGGTGCCTCTCAATTGTTATTGGAAAGATTAATGATATCA 34617
Query 193557 TCTGATCCTTTTCAAGTCGATGTTTGCACAGAATGTGG 193594
|||||| | ||| |||| ||| |||| | |||||||
Sbjct 34618 TCTGATGCATTTGAAGTTGATATTTGTAATAAATGTGG 34655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628516484513280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |