Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq1530 113 4e-20
>seq1530
Length=119309
Score = 113 bits (124), Expect = 4e-20
Identities = 180/258 (70%), Gaps = 9/258 (3%)
Strand=Plus/Minus
Query 25144 AAATTATATAAGTAGTTTTCAATTAAACAACATGCAAGTGTTTGTAAAAACATTAACCGG 25203
||||||||||| || || ||||| ||||| | || || || || ||||||||
Sbjct 25610 AAATTATATAACTACATT-------AACAA--TGCAAATTTTCGTCAAGACTTTAACCGG 25560
Query 25204 AAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAAT 25263
|| | || || | ||||| ||| | ||| |||||||| | || || |||||
Sbjct 25559 TAAGACTATTACCTTAGAAGTAGAATCTTCCGACACTATCGATAACGTTAAGTCTAAAAT 25500
Query 25264 TACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACT 25323
||||| || ||||| || || ||||| ||| | | |||| | || |||||| |
Sbjct 25499 CCAAGATAAGGAAGGTATTCCACCAGATCAACAACGTTTGATTTTTGCTGGTAAACAATT 25440
Query 25324 CGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGT 25383
||||| | ||||| | | ||| ||||| || ||||| ||||| || | ||||||||
Sbjct 25439 AGAAGACGGTAGAACTTTATCCGACTACAACATCCAAAAGGAATCTACTTTACATTTAGT 25380
Query 25384 GTTAAGATTGAGAGGAGG 25401
||||||||| ||||| ||
Sbjct 25379 GTTAAGATTAAGAGGTGG 25362
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || || || |||||||| || | ||||| | ||||| ||| |
Sbjct 25360 ATGCAAATTTTCGTTAAGACCTTAACCGGTAAGACCATCACCTTGGAAGTTGAATCTTCT 25301
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| ||||| || | || || ||||| ||||| || ||||| || || |||||
Sbjct 25300 GACACTATTGACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCTCCAGATCAA 25241
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
||| | | |||| | || |||||| | ||||||| ||||| | || |||||
Sbjct 25240 CAACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACATTATCTGACTACAAC 25181
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|| ||||| ||||| || | |||||||| || ||||||||||| ||
Sbjct 25180 ATCCAAAAGGAATCTACTTTACATTTAGTTTTGAGATTGAGAGGTGG 25134
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || || || ||||| || || | || || | ||||| ||| |
Sbjct 25132 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTTGAATCTTCT 25073
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| ||||| || | || || ||||| ||||| || ||||| || || |||||
Sbjct 25072 GACACTATTGACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCACCAGATCAA 25013
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
||| | | |||| | || |||||| | ||||| | ||||| | ||| |||||
Sbjct 25012 CAACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACATTATCCGACTACAAC 24953
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|| ||||| ||||| || | |||||||| |||||||||||||| ||
Sbjct 24952 ATCCAAAAGGAATCTACTTTACATTTAGTTTTAAGATTGAGAGGTGG 24906
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445083979227360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |