Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq1308 215 6e-51
seq1387 98.7 1e-15
seq1399 93.3 5e-14
seq1452 84.2 3e-11
>seq1308
Length=6085
Score = 215 bits (238), Expect = 6e-51
Identities = 865/1345 (64%), Gaps = 29/1345 (2%)
Strand=Plus/Plus
Query 110681 AACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCA 110740
|| ||||| || || |||||| || ||||||| || ||||||||||| ||||||
Sbjct 3741 AATTCACCAGCAAGAACTCTTCTGGAATAAATGTTTGAAGTATATGGTTCAAAACATTCA 3800
Query 110741 TTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTA 110800
||||||||||||||||||| || || || |||||||| || || | |||||| |||
Sbjct 3801 TTATTACCCAAGATTTGTGATGTTGAAGCAGTTGGCATAGGAGCAACCAAAAGTGAGTTT 3860
Query 110801 CGAAGACCCTTCTCCTTG--ATGCGTTCCTTGAGAACATCCCAGTCG--TAGTTGAGCTT 110856
| | || | || ||| || || || | | |||||| || || || || ||
Sbjct 3861 CTTAATCCATGCT--TTGCCATATTTTGTTTTAAAGTATCCCAATCCCATAATTCAG-TT 3917
Query 110857 GGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAA 110916
||||| |||| | | ||| | || | | ||||||||| || || ||||| | | |
Sbjct 3918 GGTTTTCTATTCC-ATAAATCATATTGTAATAACCCTTGGGATGCTGGTGAACCTTGATA 3976
Query 110917 GGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATA 110976
| || ||| | ||||| ||| || |||||| | || | | ||||| ||
Sbjct 3977 AGATTGATATGGACCTTCTTCTTGGGCTAATTCAATAGAAGTTTCAACAGCAGCGTGGTA 4036
Query 110977 CATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCG 111036
||||||||||| || || ||| | || ||||||| | |||||||||| |||
Sbjct 4037 AATGGTTTCAAAAATTTGAATATTTAATTCTCTGGCTTCTTGAGAATCAAATG-GTAAT- 4094
Query 111037 GCACAAA---ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCG 111093
| ||| || || |||| || | |||||| || |||||| |||| ||||| | |
Sbjct 4095 -CTTAAAGCCATGAAAGCATCAGCCAAACCTTGGACCCCCAAAGCAATTGGTCTATTTTT 4153
Query 111094 CATATTAGACTTTCGCGCAGTCTC-AACGGGATAAAAATTTCTGTCAATGACTCGGTTTA 111152
|||||| || ||| || ||| ||| |||||| |||| | ||||| ||| ||||
Sbjct 4154 CATATTTGAATTTTTGGCT-TCTGGAACAGGATAATAATTACGATCAATAACTTTATTTA 4212
Query 111153 GATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT-----CAAAAGTGCG 111207
||| ||||||||||| || |||||||| | ||| ||| ||| || | ||
Sbjct 4213 AATTACGAGTAACAATCTTGGTAATTTCATGTAATTTATCAAAATTATACCATGAATGAT 4272
Query 111208 AGTC-TCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCT 111266
|| |||| | ||| || ||| | ||||||||| || ||||| || ||||| |
Sbjct 4273 CATCATCTTTTTCAACAAACGCTGGTAAGGCGATTGAAGCTAAATTACAGACAGCAACTT 4332
Query 111267 CATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCA 111326
| || || || || | |||||| ||||||||| || ||||| | || |
Sbjct 4333 CTTCAGGTGATGAATATTCAACAATTTCACAACATAAGTTAGATGATTTAATAATACCTA 4392
Query 111327 AATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCG 111386
|||||||||| || |||| | || || ||||| || || | ||| | || || || |
Sbjct 4393 AATTCTTTTGATTGGTCTTTTCATTACAAGCATCTTTATATAACATAAATGGAGTACCAG 4452
Query 111387 TCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGC-TGGTACAATGGCGTT 111444
| || || || | || | ||| | | ||| || | | | | | || || | |
Sbjct 4453 TTTCAGTTTGGGCTTCTAAAATGGAATACCATAATTTTTGTGCCTTAATAGTTTGTC--T 4510
Query 111445 GGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTC 111504
| || || || || || ||| || | |||||| || ||||| | ||
Sbjct 4511 ACCACGACCTTCACGTTCATATTTTTCATATAATTGTTCAAATTCTTCACCATAAACATC 4570
Query 111505 GGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCG 111564
| | || || || | | || | || | | ||| | |||| || || || ||
Sbjct 4571 AGGTAATCCAGGAGCTTCATTAGGGGAAAATAATGTCCAATCACCATTTTGTTCCACACG 4630
Query 111565 CTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTC 111624
|||||| || | || |||||||| | | || || | |||||| | | |||||
Sbjct 4631 CTTCATAAATAAATCAGGAATCCATAATGCTGGGAATAAATCTCTGGCTCTAATTTCTTC 4690
Query 111625 GTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAG 111684
| |||||| || || | |||| || || | ||||| | |||||||| || |
Sbjct 4691 TTTACCTTGATTTTTTCTAATATCAATAAAATCAAAAATATCTGAATGCCATGGTTCTAA 4750
Query 111685 ATAGACTGCGATAGATCCCTTTC---GACGCCCAGCTTGATTTACATAGCGCGCTGTGGC 111741
||||| || | || || || | ||| |||||| ||||| || || |||
Sbjct 4751 ATAGAGGGCAAAAGCACCTGGTCTCTTATTACCACCTTGATCGACATAACGTGCGGTGTT 4810
Query 111742 GTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACG 111801
||| || || || | ||| || |||||||| | || |||||| || || ||||
Sbjct 4811 GTTGAAAACACGTACCATGGGGATAATACCGTTGGAAGTACCATTAGTACCAGCAATATA 4870
Query 111802 AGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT 111861
|| | | | | | || ||| || || | |||||||| ||||| | |||||| ||
Sbjct 4871 AGCCCCAGTAGAACGAATATTATGAATATGTAAACCAATACCACCAGCACTCTTTGAAAT 4930
Query 111862 TTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGAT 111921
||||| | | ||| |||| || || | ||||| || || || |||| |
Sbjct 4931 CAATGCACATGTTTTCAAAGTATCATAAATCCCATCAATTGAATCATCTTTCATGGCAAC 4990
Query 111922 AAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGC 111981
| ||| || ||||| || || ||||| ||||| ||||| || | ||||||| |
Sbjct 4991 TAAGAAACATGACGACATTTGTGGACTTGGGGTACCGGCATTAAATAAAGTTGGTGAACC 5050
Query 111982 GTGAATGAACATACCTTGGGACATC 112006
||| |||| | ||| ||||||
Sbjct 5051 ATGAGTGAAAAACTTTTGTGACATC 5075
>seq1387
Length=15432
Score = 98.7 bits (108), Expect = 1e-15
Identities = 331/508 (65%), Gaps = 17/508 (3%)
Strand=Plus/Plus
Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736
|| ||||||| |||| | |||||||||||| || ||||||||| | || | |||
Sbjct 2514 CCTTCATCTCTACAAATTAATTCATTTGAGAAAGTTAAACCTGGCATTAACCCTCTTTTC 2573
Query 122737 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796
|| ||||| |||| | | ||||| || ||||| ||||| || ||| |||||
Sbjct 2574 TTTAACCAGAAAATTGAGGCAAATGATCCACTAAAGAAAATACCTTCAACAGCAGCAAAT 2633
Query 122797 GCAAAAAGGCGTTCGGCGAAGGAGCGAGACTT-TGCATCA---AACCATTTCATTGCCCA 122852
|||| | | ||| || | |||||| | |||| | |||| | | ||||||
Sbjct 2634 GCAACTAATCTTTCAGCATA----TAAGACTTCAGTATCAGTGATCCATCTTAATGCCCA 2689
Query 122853 TTTCGC-CTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTTTT 122911
| || ||||||| ||||| || | | || || || | |||||| | | ||
Sbjct 2690 ATCAGCTTTTCTTCT-GATACAAGGAATATGTTCAATAGCATTAAATAAGTAATCAGCTT 2748
Query 122912 CAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCATTT 122971
| | ||| ||||| || | ||||| || ||||| ||||| ||||| |||
Sbjct 2749 CCTTTGGATCTTTAATATAAGTATCAATTAAAAGGGAATAAGTTTCAGAATGAATATTTT 2808
Query 122972 CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCATCCGCAA 123031
|| | |||| | | |||||||| ||||| || ||||| || | | ||
Sbjct 2809 CAATCATAATTTGAAACCCATAGAATGATTTAGCTTCTGGAATTTGAACTTCTGCTGAAA 2868
Query 123032 AATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGGATGT 123091
|||| | | | | ||| ||| |||||| ||||| || ||||||||||||| | ||
Sbjct 2869 AATTTTCAATTAAATTTTCATTAACAATACCATCAGATGCAGCAAAGAATGCTAAGA--C 2926
Query 123092 ACTT--TATGAATTTCTTTTCATTTTCATTCAGGGTCT---TCCAGTCGTCAAGATCTTT 123146
||| ||||| | |||||| ||||||| | | |||| || | | ||| ||
Sbjct 2927 TCTTGAAATGAAATATCTTTCATCATCATTCAATTTATCTCTCCAATCATGTAAATCCTT 2986
Query 123147 GGACAAATCAACTTCTTCCGCAGTCCAA 123174
||||||| |||||| |||||||||
Sbjct 2987 ACTTAAATCAATTTCTTCAGCAGTCCAA 3014
>seq1399
Length=19921
Score = 93.3 bits (102), Expect = 5e-14
Identities = 116/159 (73%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 164604 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 164663
||||| |||||||| || || || || | || || |||||||||||| ||||||
Sbjct 12871 TATGGCCGTGTTGCCCCTCGTTCAGGATTGGCGGTTAAGCATGGTATTTCTACTGGTGCT 12930
Query 164664 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 164723
|| ||||||||| | || |||| ||||||||| ||||| || | || ||||| | ||
Sbjct 12931 GGAGTTATTGATGCTGATTATAGAGGTGAAGTTAAAGTTGTATTATTTAATCATAGTGAA 12990
Query 164724 AAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAA 164762
|| || ||||| || ||| || || | || ||||||
Sbjct 12991 AAGGATTTTGAAGTTAAGGTTGGTGAAAGAATTGCACAA 13029
>seq1452
Length=85594
Score = 84.2 bits (92), Expect = 3e-11
Identities = 219/331 (66%), Gaps = 21/331 (6%)
Strand=Plus/Plus
Query 11535 TGTCAAAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTC--TCATCATT 11592
||||||| ||||||||||| | | |||||| | | || |||| | ||||| ||
Sbjct 56962 TGTCAAAACCATCCATCTCAACTAAAAGTTGATTCAAAG--TGGTCTCACGTTCATCGTT 57019
Query 11593 TGCTGGCATACCACCAGCACTGCGTT---------GCTTGCCCACCGCATCAATCTCATC 11643
||| ||||| ||| ||| || |||| || | |||||||| |||||
Sbjct 57020 TGC------ACCACTTGCATTGCCTTTGGCACGCAGCTTCCCAATTGCATCAATTTCATC 57073
Query 11644 AATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTT 11703
|| |||||||| | || |||||| || || ||| || | || || || |
Sbjct 57074 AACAAAGACAATCGAAGGGGCATTTTCACGAGCAGTTTTGAACAAGTCACGTACACGAGA 57133
Query 11704 GGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGGAT-GAATGGGA 11762
||||| ||||| |||||||| || || || | | |||| || | || ||| || |
Sbjct 57134 TGCACCTACACCGACAAACATTTCGACGAATTCAGAACCAGA-AACAGAATAGAAAGGTA 57192
Query 11763 CATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCG 11822
| || |||||| || ||||| ||| || || ||||| || |||||||| || |
Sbjct 57193 CCCCTGCTTCACCAGCAGTGGCTTTGGCAAGAAGAGTCTTACCAGTACCTGGAGGGCCAG 57252
Query 11823 CGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853
|||| || |||| ||||| ||||||||
Sbjct 57253 AAAGAATTGCCCCTCTAGGGATTTTGGCACC 57283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628017296200800
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