Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq1530 84.2 2e-11
>seq1530
Length=119309
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/214 (69%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||||||||| || || || | ||||| || ||||| | || || ||| |
Sbjct 25132 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTTGAATCTTCT 25073
Query 27850 GACGATGT--ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| | | ||||| ||||| ||||| || || |||||| |||| || |
Sbjct 25072 GACACTATTGACAAT--GTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCACCAGATC 25015
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| ||||| || |||||||| || |||||||| || |||| | | || ||||| ||||
Sbjct 25014 AACAACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACATTATCCGACTACA 24955
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTT 28001
|||||||||| || ||||| ||||| |||||
Sbjct 24954 ACATCCAAAAGGAATCTACTTTACATTTAGTTTT 24921
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355854276662271
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |