Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq1705 122 2e-22
seq1530 104 5e-17
>seq1705
Length=31738
Score = 122 bits (134), Expect = 2e-22
Identities = 147/200 (74%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967
||||| || |||||||||||||| || | ||||||||| |||||||||| || ||
Sbjct 13693 GTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTGCTTACCA 13634
Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027
|||||||| | || || ||||| | | || |||||||| ||||| || || ||||
Sbjct 13633 GCGAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGATTTG 13574
Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087
||| | || | | |||| ||| || ||||| | |||||||| || || || | |||
Sbjct 13573 ACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCAGTTAAGGTC 13514
Query 152088 TTCACGAAGACCTGCATTTT 152107
|| ||||| | ||||||||
Sbjct 13513 TTGACGAAAATTTGCATTTT 13494
>seq1530
Length=119309
Score = 104 bits (114), Expect = 5e-17
Identities = 146/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960
||| | |||||| || |||||||||||||| |||| ||||||||| || |||||||
Sbjct 25385 ATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCGTCTTCTAATTG 25444
Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
||| || || || || | | || || || | | || |||||||| ||||| |||||
Sbjct 25445 TTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATACCTTCCTTATCTTGGATTTT 25504
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080
|| || | || | |||| ||| |||||||| | |||||||| || || ||
Sbjct 25505 AGACTTAACGTTATCGATAGTGTCGGAAGATTCTACTTCTAAGGTAATAGTCTTACCGGT 25564
Query 152081 GAGAGTCTTCACGAAGACCTGCATT 152105
| |||||| ||||| | ||||||
Sbjct 25565 TAAAGTCTTGACGAAAATTTGCATT 25589
Score = 102 bits (112), Expect = 2e-16
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
||| | ||| | ||| | |||||| || |||||||||||||| || | ||| ||||| ||
Sbjct 24689 TCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGATAATGTTCTACC 24748
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
|||||||| ||| || ||||| || | | || || || | | ||| ||||||||
Sbjct 24749 ATCTTCTAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGTGGGATACCTTCCTT 24808
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
||||| ||||| |||||| | || | |||| ||| || ||||| | || ||
Sbjct 24809 ATCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTGAT 24868
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || | ||||| ||||| | |||||
Sbjct 24869 GGTCTTACCGGTTAAGGTCTTGACGAAAATTTGCAT 24904
Score = 93.3 bits (102), Expect = 1e-13
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960
||| | |||||| || |||||||||||||| |||| ||| ||||| || |||||||
Sbjct 24929 ATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGATAATGTTCTACCGTCTTCTAATTG 24988
Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
||| || || || || | | || || || | | || |||||||| ||||| |||||
Sbjct 24989 TTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATACCTTCCTTATCTTGGATTTT 25048
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080
|||||| | || | |||| ||| || ||||| | ||||| || || || ||
Sbjct 25049 AGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTAATGGTCTTACCAGT 25108
Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104
| ||||| ||||| | |||||
Sbjct 25109 TAAGGTCTTGACGAAAATTTGCAT 25132
Score = 89.7 bits (98), Expect = 1e-12
Identities = 152/219 (69%), Gaps = 1/219 (0%)
Strand=Plus/Plus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960
||| | |||||| || |||||||||||||| || | ||| ||||| ||||||||||
Sbjct 25157 ATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGATAATGTTCTACCATCTTCTAATTG 25216
Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
||| || || || || | | || || || | | || |||||||| ||||| |||||
Sbjct 25217 TTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTTATCTTGGATTTT 25276
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080
|||||| | || | |||| ||| || ||||| | || || || || || ||
Sbjct 25277 AGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTGATGGTCTTACCGGT 25336
Query 152081 GAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118
| ||||| ||||| | ||||| ||| |||| |||
Sbjct 25337 TAAGGTCTTAACGAAAATTTGCATACCACCTCTTAATCT 25375
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153793110824783
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |