Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq1530 167 5e-36
seq1705 159 7e-34
>seq1530
Length=119309
Score = 167 bits (184), Expect = 5e-36
Identities = 160/205 (78%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTG 282955
|||||| || ||| ||||||||||||||||| | | || | || || |||| |||
Sbjct 25385 ATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCGTCTTCTAATTG 25444
Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015
||| || ||||| |||||||||||||| || |||||||| ||||| |||||||| ||
Sbjct 25445 TTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATACCTTCCTTATCTTGGATTTT 25504
Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075
| || ||| ||||||||||||| |||| ||| ||||| | || || |||||||| ||
Sbjct 25505 AGACTTAACGTTATCGATAGTGTCGGAAGATTCTACTTCTAAGGTAATAGTCTTACCGGT 25564
Query 283076 CAAAGTCTTAACGAATATCTGCATT 283100
|||||||| ||||| || ||||||
Sbjct 25565 TAAAGTCTTGACGAAAATTTGCATT 25589
Score = 165 bits (182), Expect = 2e-35
Identities = 159/204 (78%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTG 282955
|||||| || ||| ||||||||||||||||||| | || | ||||| |||| |||
Sbjct 25157 ATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGATAATGTTCTACCATCTTCTAATTG 25216
Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015
||| || ||||| |||||||||||||| || |||||||| ||||| |||||||| ||
Sbjct 25217 TTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTTATCTTGGATTTT 25276
Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075
| || || | || |||||||| |||| ||| ||||| | ||||| |||||||| ||
Sbjct 25277 AGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTGATGGTCTTACCGGT 25336
Query 283076 CAAAGTCTTAACGAATATCTGCAT 283099
|| ||||||||||| || |||||
Sbjct 25337 TAAGGTCTTAACGAAAATTTGCAT 25360
Score = 152 bits (168), Expect = 1e-31
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTG 282955
|||||| || ||| ||||||||||||||||||| | || | ||||| |||| |||
Sbjct 24701 ATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGATAATGTTCTACCATCTTCTAATTG 24760
Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015
||| || || || |||||||||||||| || || ||||| ||||| |||||||| ||
Sbjct 24761 TTTACCAGCGAAAATCAAACGTTGTTGATCTGGTGGGATACCTTCCTTATCTTGGATTTT 24820
Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075
| || || | || |||||||| |||| ||| ||||| | ||||| |||||||| ||
Sbjct 24821 AGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTGATGGTCTTACCGGT 24880
Query 283076 CAAAGTCTTAACGAATATCTGCAT 283099
|| ||||| ||||| || |||||
Sbjct 24881 TAAGGTCTTGACGAAAATTTGCAT 24904
Score = 147 bits (162), Expect = 5e-30
Identities = 155/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTG 282955
|||||| || ||| ||||||||||||||||| | | || | || || |||| |||
Sbjct 24929 ATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGATAATGTTCTACCGTCTTCTAATTG 24988
Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015
||| || ||||| |||||||||||||| || |||||||| ||||| |||||||| ||
Sbjct 24989 TTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATACCTTCCTTATCTTGGATTTT 25048
Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075
| || || | || |||||||| |||| ||| ||||| | || || |||||||| ||
Sbjct 25049 AGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTAATGGTCTTACCAGT 25108
Query 283076 CAAAGTCTTAACGAATATCTGCAT 283099
|| ||||| ||||| || |||||
Sbjct 25109 TAAGGTCTTGACGAAAATTTGCAT 25132
>seq1705
Length=31738
Score = 159 bits (176), Expect = 7e-34
Identities = 159/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGT 282956
||||| || ||| ||||||||||||||||||| | || | ||||| |||| |||
Sbjct 13699 TGTAAGGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTGC 13640
Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016
|| || || ||||| || | |||||||||| |||||||| |||||||||||||||||
Sbjct 13639 TTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTG 13580
Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTC 283076
| ||| || | || || ||||| |||| ||| ||||| | || || |||||||| ||
Sbjct 13579 GATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCAGTT 13520
Query 283077 AAAGTCTTAACGAATATCTGCATTTT 283102
|| ||||| ||||| || ||||||||
Sbjct 13519 AAGGTCTTGACGAAAATTTGCATTTT 13494
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046714080548942
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |