Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq1387 398 8e-106
>seq1387
Length=15432
Score = 398 bits (440), Expect = 8e-106
Identities = 635/903 (70%), Gaps = 19/903 (2%)
Strand=Plus/Plus
Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264
||||||||| |||||||| || ||| | |||| ||||| || || ||||| |
Sbjct 2189 CATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTTACCAGC 2248
Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGA 23324
|||||| |||||||||||||| ||||||||||| | |||||| || ||| || |
Sbjct 2249 TAATGAAATATTTTCCATAAAGTCAAATGGATTTTGAACATTATAAAC--CTTCTTATTA 2306
Query 23325 T--AATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAG 23382
||| | ||| | || || || |||||||||| ||||||||||||||| | | ||
Sbjct 2307 CCAAATGCAACTAATAATCTGTCGGCAACAAATTCAACATATTGACACATCAATTTACAG 2366
Query 23383 TTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACA 23442
|| ||||||| || | ||||| | |||||| || || ||||||||| ||||
Sbjct 2367 TTCATACCTAATAAACTAACTGGTAATGCATCAGTGAAATATTCTTTTTCAATATCAACA 2426
Query 23443 GCATCTTTAATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAAC 23502
|| || ||| || | | | | |||| | ||| || || |||| |||
Sbjct 2427 GCTTCAACAATAATCTTTTCCACGATTTCTGGATCTGGTCTATTGTTCAAATGAGCAAAT 2486
Query 23503 AATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAAT 23562
|||||||| ||||||||| ||||| |||||||| |||| ||| |||||||| || ||
Sbjct 2487 AATAAACAAGCAAAATCAGTATGTAACCCTTCATCTCTACAAATTAATTCATTTGAGAAA 2546
Query 23563 GTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAA 23622
||||| ||||||||||| |||| ||| || | ||| || |||| ||||||||||| |
Sbjct 2547 GTTAAACCTGGCATTAACCCTCTTTTCTTTAACCAGAAAATTGAGGCAAATGATCCACTA 2606
Query 23623 AAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAA 23682
||||||||||| |||||||| ||||| || || | | | | || || | | | |
Sbjct 2607 AAGAAAATACCTTCAACAGCAGCAAATGCAACTAATCTTTCAGCATATAAGACTTCAGTA 2666
Query 23683 TCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATT 23742
|||| |||||| || || ||||| ||| || | | | ||| ||| ||||||
Sbjct 2667 TCAGTGATCCATCTTAATGCCCAATCAGCTTTTCTTCTGATACAAGGAATATGTTCAATA 2726
Query 23743 GCTTTTAAGAGAAAAGTTTTTTCTTCATT---ATCTGTTATATATGTATCAATTAGTAAA 23799
|| || || | || | |||| || |||| | ||||| |||||||||| |
Sbjct 2727 GCATTAAATAAGTAA---TCAGCTTCCTTTGGATCTTTAATATAAGTATCAATTAAAAGG 2783
Query 23800 CTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCT 23859
||| |||||||||||||||||||||| ||| ||||||||||| || || |||||
Sbjct 2784 GAATAAGTTTCAGAATGAATATTTTCAATCATAATTTGAAACCCATAGAATGATTTAGCT 2843
Query 23860 TCAGACAATTGAACATC-ATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATC 23918
|| | | |||||| || | |||||| ||| | ||||||||| ||||||||||||||
Sbjct 2844 TCTGGAATTTGAACTTCTGCTGAAAAAT-TTTCAATTAAATTTTCATTAACAATACCATC 2902
Query 23919 ACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGAT--AAT 23976
| ||||||||||| || | || | || |||| |||||||||| | || |||
Sbjct 2903 AGATGCAGCAAAGAATGCTAAGACTCTTGAAATGAAATATCTTTCATCA--TCATTCAAT 2960
Query 23977 TT---TTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTT 24033
|| | ||||||||| | ||| || |||||||| ||| ||| | |||||||| |
Sbjct 2961 TTATCTCTCCAATCATGTAAATCCTTACTTAAATCAATTTCTTCAGCAGTCCAAAATGAT 3020
Query 24034 GCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAAT 24093
|| || ||| || | | ||||||| |||| || | |||||||| || || |||
Sbjct 3021 GCTTCTGCTTTCTTGTAAAATTGCCAAATTTCATGATATCTAATTGGAAACATAACAAAT 3080
Query 24094 CTA 24096
|||
Sbjct 3081 CTA 3083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521475790662200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |