Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq1705 116 9e-21
seq1530 107 5e-18
>seq1705
Length=31738
Score = 116 bits (128), Expect = 9e-21
Identities = 148/203 (73%), Gaps = 3/203 (1%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| |||||||||| || || | || || || || || ||| | || || |||
Sbjct 13494 AAAATGC---AAATTTTCGTCAAGACCTTAACTGGTAAGACTATTACCTTAGAAGTTGAA 13550
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| |||||||| || || |||||| ||||| || ||||| ||||| || || ||
Sbjct 13551 TCTTCTGACACCATTGACAATGTCAAATCCAAGATCCAAGACAAGGAAGGTATTCCACCT 13610
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
||||| ||| || | |||||||| || || || | |||||||| || ||| | | ||
Sbjct 13611 GACCAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGAC 13670
Query 178095 TATAACGTCCAAAAAGAATCAAC 178117
|| ||| ||||||| ||||| ||
Sbjct 13671 TACAACATCCAAAAGGAATCTAC 13693
>seq1530
Length=119309
Score = 107 bits (118), Expect = 5e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || | || || || || |||||| | || || ||| || |||
Sbjct 24901 CAAATTTTCGTCAAGACCTTAACCGGTAAGACCATCACCTTGGAAGTTGAATCTTCTGAC 24842
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| || || || || || ||||| ||||| || || || |||
Sbjct 24841 ACTATTGACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATCCCACCAGATCAACAA 24782
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || ||||| || ||||| | |||||||| || || | | || || ||| ||
Sbjct 24781 CGTTTGATTTTCGCTGGTAAACAATTAGAAGATGGTAGAACATTATCTGACTACAACATC 24722
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| ||||| || | ||| | || |||||| | |||
Sbjct 24721 CAAAAGGAATCTACTTTACATTTAGTCTTGAGATTAAGA 24683
Score = 107 bits (118), Expect = 5e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || | || || || || |||||| | || || ||| || |||
Sbjct 25357 CAAATTTTCGTTAAGACCTTAACCGGTAAGACCATCACCTTGGAAGTTGAATCTTCTGAC 25298
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| || || || || || ||||| || ||||| || || |||
Sbjct 25297 ACTATTGACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCTCCAGATCAACAA 25238
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || || || || ||||| | |||||||| || || | | || || ||| ||
Sbjct 25237 CGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACATTATCTGACTACAACATC 25178
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| ||||| || | ||| | ||||||||| | |||
Sbjct 25177 CAAAAGGAATCTACTTTACATTTAGTTTTGAGATTGAGA 25139
Score = 102 bits (112), Expect = 2e-16
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || ||| | || || || || || ||| | || || ||| || |||
Sbjct 25585 CAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCTTAGAAGTAGAATCTTCCGAC 25526
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || || || || || || ||||| || || || || || |||
Sbjct 25525 ACTATCGATAACGTTAAGTCTAAAATCCAAGATAAGGAAGGTATTCCACCAGATCAACAA 25466
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || || || || ||||| | ||||| || || ||| | |||| || ||| ||
Sbjct 25465 CGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTTTATCCGACTACAACATC 25406
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| ||||| || | ||| | || || ||| | |||
Sbjct 25405 CAAAAGGAATCTACTTTACATTTAGTGTTAAGATTAAGA 25367
Score = 93.3 bits (102), Expect = 1e-13
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || | || || || || || ||| | || || ||| || |||
Sbjct 25129 CAAATTTTCGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTTGAATCTTCTGAC 25070
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| || || || || || ||||| || || || || || |||
Sbjct 25069 ACTATTGACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCACCAGATCAACAA 25010
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || || || || ||||| | ||||| || || || | |||| || ||| ||
Sbjct 25009 CGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACATTATCCGACTACAACATC 24950
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| ||||| || | ||| | ||||| ||| | |||
Sbjct 24949 CAAAAGGAATCTACTTTACATTTAGTTTTAAGATTGAGA 24911
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203702313084362
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |