Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq46 192 6e-44
>seq46
Length=215403
Score = 192 bits (212), Expect = 6e-44
Identities = 572/874 (65%), Gaps = 15/874 (2%)
Strand=Plus/Plus
Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733
|||| ||||| ||| | |||||||| ||||| || || || ||| || || || |
Sbjct 149140 TTTGATAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCTAATGAAATGTTTT 149199
Query 16734 CCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791
||||||||||||| |||||||| | || ||| || | | |||| | | | | |
Sbjct 149200 CCATGAAATCAAATGGATTAGTGACATTGTAAACCTTCTT-ATTACCAAA-TGCTACTAA 149257
Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAG 16851
||||||||| || |||||||| | ||||| |||||||| | |||||||| |||| |
Sbjct 149258 TAATCTATCAGCAACAAATTCAACGTATTGACACATTAACTTACAGTTCATACCTAACAA 149317
Query 16852 ACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911
|| || || | || || || || ||| | || ||| |||| || || ||||||
Sbjct 149318 ACTAACAGGTAAGGCATCAGTGAAGAATTCCTTTTCAATAGCAACAGCCTCAACAATAAT 149377
Query 16912 ACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971
| ||| ||| | | ||| ||| || | ||| || | | ||| || ||
Sbjct 149378 CTTTTCAATAATTTCTGCAGCTGGTCTATTTTCCAAATGGGAGAATAATAAACAAGCAAA 149437
Query 16972 ATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCAT 17031
||| |||||| || || ||||| | ||| | |||||| || ||||| || || |||||
Sbjct 149438 ATCAGTATGTAAACCTTCATCTCTACAGATTAATTCGTTGGAGAATGTTAAACCAGGCAT 149497
Query 17032 CTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTC 17091
|||| |||||||||||||| || | ||||| || ||| ||||| ||||| ||
Sbjct 149498 TAAACCTCTCTTCTTTAACCAAAAGATGGATGCGAATGAACCACTGAAGAAAATACCTTC 149557
Query 17092 GACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTT 17151
|| | || || || | ||||| ||| || | || || | || |||||| |
Sbjct 149558 AACAGCAGCGAATGCAACTAATCTTTCAGCAAATAAGGCTTCATCGTCTGTGATCCATCT 149617
Query 17152 CTGCACCCACTCGG----CTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA 17207
| |||| || | |||| | | ||| ||| || | || || || || || |
Sbjct 149618 AAGAGCCCAGTCAGCCTTCTTTCTAATACATGGAAT--ATGG--TCAATAGCATTGAACA 149673
Query 17208 ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGG 17267
| | || ||||| | | || | ||||| || ||||| | ||| || |||| |
Sbjct 149674 AATAGTCGGCTTCCTTTGGATCCTTGATATAAGTGTCGATTAAAAGGGAATAAGTTTCAG 149733
Query 17268 AGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAA 17327
| || ||||| ||||| || || || || || ||| | |||||| | |||||||
Sbjct 149734 AATGAATGTTTTCCATCATGATTTGGAAACCATAGAAGGACTTGGCTTCTGGAATTTGAA 149793
Query 17328 CTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAA 17387
|||| | |||| ||| | | |||||| || ||||| || || || || || |
Sbjct 149794 CTTCAGCTGAGAAGTTTTCAACCAAATTTTCATTAACGATACCATCTGAAGCAGCAAAGA 149853
Query 17388 ACGCCAATATATGCTTAATGAAATATTTTTCGTC-CGGTGTAA--GAACGCGCCAGTCCT 17444
|||| | || |||||| | |||||| | ||| | | ||| || |
Sbjct 149854 ACGCAAGGATTCTAGAAATGAAGAAACGTTCGTCGTCATTTAATTTATTTCTCCAATCGT 149913
Query 17445 TTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTAT 17504
|||||||||| || ||| | |||||||| ||||| ||| ||| | |||||||| |
Sbjct 149914 TTAAATCTTTACTTAAATCGATTTCTTCGGCAGTCCAGAAAGAAGCTTCAGCCTTTTTGT 149973
Query 17505 ACATATTCCAAATATCATTGTATTGTATGGGGAA 17538
| | | |||||| |||| | || || |||||
Sbjct 149974 AAAATTGCCAAATTTCATGGAATCTAATTGGGAA 150007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517543685081280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |