Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq254 123 2e-23
seq253 96.9 3e-15
>seq254
Length=76587
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 25031 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 25090
|||||||||||| ||| |||| || || || || || ||||||||| ||| ||| |
Sbjct 43144 AAAAATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATTACCTTAGAAGTCGAATC 43085
Query 25091 CGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 25150
| || || | | | || |||| || || ||||| |||||| | || ||
Sbjct 43084 TTCCGACACCATTGACAATGTCAAATCCAAGATCCAAGATAAGGAAGGTATTCCACCTGA 43025
Query 25151 TCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTA 25210
|||||||||| | |||||||| || || ||||| |||||| | |||| | | || ||
Sbjct 43024 TCAACAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTA 42965
Query 25211 CAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
||| || ||||||||||||||| | ||| |||| ||| ||||| |||| ||
Sbjct 42964 CAACATCCAAAAGGAATCTACTTTACACTTGGTCTTAAGATTAAGAGGTGG 42914
>seq253
Length=293773
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093
||||||||| ||| | ||||| || || || || || |||||| ||| ||| | |
Sbjct 106759 AATGCAAATCTTCGTTAAAACTTTAACCGGTAAGACTATTACCTTAGAAGTTGAATCTTC 106700
Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153
|| || | | | |||| |||||| ||||| |||||| | || |||||
Sbjct 106699 TGACACCATTGATAACGTCAAATCTAAAATTCAAGATAAGGAAGGTATCCCACCTGATCA 106640
Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213
|||| | | ||||| || || |||||||| |||||| | |||| | | || |||||
Sbjct 106639 ACAACGTTTAATCTTCGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGACTACAA 106580
Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| ||||||||||||||| | || |||| ||| |||| |||| ||
Sbjct 106579 CATCCAAAAGGAATCTACTTTACATTTGGTTTTAAGATTGAGAGGTGG 106532
Score = 87.8 bits (96), Expect = 1e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 25119 AAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAA 25178
|||||| ||||| |||||| | || ||||||||| | | ||||| || || |||
Sbjct 106446 AAAATTCAAGATAAGGAAGGTATCCCACCTGATCAACAACGTTTAATCTTCGCTGGTAAA 106387
Query 25179 CAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCAC 25238
||||| |||||| | |||| | | || ||||| || ||||||||||||||| | ||
Sbjct 106386 CAATTAGAAGATGGTAGAACTTTATCTGACTACAACATCCAAAAGGAATCTACTTTACAT 106327
Query 25239 ATGGTGTTACGATTACGAGGAGG 25261
|||| ||| |||| |||| ||
Sbjct 106326 TTGGTTTTAAGATTGAGAGGTGG 106304
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410795318050544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |