Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017- 04-24] 296 sequences; 15,098,268 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq276 104 2e-17 >seq276 Length=61907 Score = 104 bits (114), Expect = 2e-17 Identities = 265/400 (66%), Gaps = 4/400 (1%) Strand=Plus/Plus Query 97231 ACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACA 97290 |||||||| |||| || |||||||| || || | |||||||| | || ||| Sbjct 8623 ACATAAAATTGACAAAAGACATGACATGGTGGGAGTGCCATTTTAGCAAAATCAGGTGGG 8682 Query 97291 TTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATC 97350 ||||||||| |||| | ||||||||||| ||| || || | || | || || | Sbjct 8683 TTCCAAGCAGACATGATAATTCTTCTATCATATGGATTCGTCTTTAATTTCTTTATAACA 8742 Query 97351 TGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCT 97410 | | |||||||||| |||| || ||||| | | | | |||||| || Sbjct 8743 TCTTGTAATTGATCATATCCTTGACCGGTATAATCAGCATCACAATCCACATATTCAGCA 8802 Query 97411 CCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAG 97470 |||||||| ||||||||||| |||||||| || || | || ||||| | || | Sbjct 8803 CCAAAATGTCTCCATTGGAAACCATAAACCGGACCTAAATCACCTTCACGACGATGAGTC 8862 Query 97471 AAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACC--AG 97528 || || | ||||| ||||| | ||||| || | |||||||| | ||| || | Sbjct 8863 AATCCTAATTTATCCAAATATTCACGTGATCCGTTACCTTCCCAAATTTTCACGCCTTTG 8922 Query 97529 ATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAA 97588 || ||| ||||| ||||| || || ||||||||||| | ||| | | | Sbjct 8923 TCACT-CAAAAGTTTTGC-ATCAGTTGAACCAGCTATAAACCACAAGAGTTCATGAATGA 8980 Query 97589 CACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAA 97628 |||| | | ||||||||||| || || || || || || Sbjct 8981 TACCTTTTGAGAATACTCTCTTGGTAGTCAAAAGGGGGAA 9020 Score = 98.7 bits (108), Expect = 7e-16 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 97048 GCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGA 97107 |||||||| |||| | ||| | ||||| || || | ||| ||||||||||| ||| | Sbjct 8383 GCATCAATATGATCTAAATACACATGAGCGTCACCCATAGTATGAATAAATTCACCACAA 8442 Query 97108 ACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAA 97167 | | ||| |||||||| ||||| ||||||| | ||| ||| || ||||| Sbjct 8443 TCCATATCGACTACATGGGCAATCATCTTGGTTAATAATGCATATGAAGCGATATTAAAT 8502 Query 97168 GGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGA 97214 || || || |||||||||||| |||||||||||| ||| ||| || Sbjct 8503 GGAACGCCAAGTCCCATATCACATGATCTTTGATACAACAAACAAGA 8549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346782748976720