Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq276 104 2e-17
>seq276
Length=61907
Score = 104 bits (114), Expect = 2e-17
Identities = 265/400 (66%), Gaps = 4/400 (1%)
Strand=Plus/Plus
Query 97231 ACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACA 97290
|||||||| |||| || |||||||| || || | |||||||| | || |||
Sbjct 8623 ACATAAAATTGACAAAAGACATGACATGGTGGGAGTGCCATTTTAGCAAAATCAGGTGGG 8682
Query 97291 TTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATC 97350
||||||||| |||| | ||||||||||| ||| || || | || | || || |
Sbjct 8683 TTCCAAGCAGACATGATAATTCTTCTATCATATGGATTCGTCTTTAATTTCTTTATAACA 8742
Query 97351 TGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCT 97410
| | |||||||||| |||| || ||||| | | | | |||||| ||
Sbjct 8743 TCTTGTAATTGATCATATCCTTGACCGGTATAATCAGCATCACAATCCACATATTCAGCA 8802
Query 97411 CCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAG 97470
|||||||| ||||||||||| |||||||| || || | || ||||| | || |
Sbjct 8803 CCAAAATGTCTCCATTGGAAACCATAAACCGGACCTAAATCACCTTCACGACGATGAGTC 8862
Query 97471 AAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACC--AG 97528
|| || | ||||| ||||| | ||||| || | |||||||| | ||| || |
Sbjct 8863 AATCCTAATTTATCCAAATATTCACGTGATCCGTTACCTTCCCAAATTTTCACGCCTTTG 8922
Query 97529 ATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAA 97588
|| ||| ||||| ||||| || || ||||||||||| | ||| | | |
Sbjct 8923 TCACT-CAAAAGTTTTGC-ATCAGTTGAACCAGCTATAAACCACAAGAGTTCATGAATGA 8980
Query 97589 CACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAA 97628
|||| | | ||||||||||| || || || || || ||
Sbjct 8981 TACCTTTTGAGAATACTCTCTTGGTAGTCAAAAGGGGGAA 9020
Score = 98.7 bits (108), Expect = 7e-16
Identities = 122/167 (73%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 97048 GCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGA 97107
|||||||| |||| | ||| | ||||| || || | ||| ||||||||||| ||| |
Sbjct 8383 GCATCAATATGATCTAAATACACATGAGCGTCACCCATAGTATGAATAAATTCACCACAA 8442
Query 97108 ACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAA 97167
| | ||| |||||||| ||||| ||||||| | ||| ||| || |||||
Sbjct 8443 TCCATATCGACTACATGGGCAATCATCTTGGTTAATAATGCATATGAAGCGATATTAAAT 8502
Query 97168 GGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGA 97214
|| || || |||||||||||| |||||||||||| ||| ||| ||
Sbjct 8503 GGAACGCCAAGTCCCATATCACATGATCTTTGATACAACAAACAAGA 8549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346782748976720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |