Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq276 132 4e-26
>seq276
Length=61907
Score = 132 bits (146), Expect = 4e-26
Identities = 172/235 (73%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 20209 CGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAA 20268
|||| || || ||||| ||||| || ||||| || ||||||||||||||||| ||||||
Sbjct 8855 CGTCGTGAAGGTGATTTAGGTCCGGTTTATGGTTTCCAATGGAGACATTTTGGTGCTGAA 8796
Query 20269 TATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATT 20328
||||| || | | ||||| || |||||| |||||||||||| |||||||
Sbjct 8795 TATGTGGATTGTGATGCTGATTATACCGGTCAAGGATATGATCAATTACAAGATGTTATA 8736
Query 20329 AATTTAATTAAA-ACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAA 20387
|| ||||||| ||||| ||| | || ||||||||||| | | || |||||| |
Sbjct 8735 AAGA-AATTAAAGACGAATCCATATGATAGAAGAATTATCATGTCTGCTTGGAACCCACC 8677
Query 20388 AGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTT 20442
||| | || |||||| | || ||||||||| | | || |||||||| |||
Sbjct 8676 TGATTTTGCTAAAATGGCACTCCCACCATGTCATGTCTTTTGTCAATTTTATGTT 8622
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399182559943720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |