Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017- 04-24] 296 sequences; 15,098,268 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq276 132 4e-26 >seq276 Length=61907 Score = 132 bits (146), Expect = 4e-26 Identities = 172/235 (73%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 20209 CGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAA 20268 |||| || || ||||| ||||| || ||||| || ||||||||||||||||| |||||| Sbjct 8855 CGTCGTGAAGGTGATTTAGGTCCGGTTTATGGTTTCCAATGGAGACATTTTGGTGCTGAA 8796 Query 20269 TATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATT 20328 ||||| || | | ||||| || |||||| |||||||||||| ||||||| Sbjct 8795 TATGTGGATTGTGATGCTGATTATACCGGTCAAGGATATGATCAATTACAAGATGTTATA 8736 Query 20329 AATTTAATTAAA-ACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAA 20387 || ||||||| ||||| ||| | || ||||||||||| | | || |||||| | Sbjct 8735 AAGA-AATTAAAGACGAATCCATATGATAGAAGAATTATCATGTCTGCTTGGAACCCACC 8677 Query 20388 AGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTT 20442 ||| | || |||||| | || ||||||||| | | || |||||||| ||| Sbjct 8676 TGATTTTGCTAAAATGGCACTCCCACCATGTCATGTCTTTTGTCAATTTTATGTT 8622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399182559943720